Template-based Modeling Results for RL21_ECOLI


  Submitted Primary Sequence

>Length 103
MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGISA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGISA
CEEEEEECCEEEEEECCCEEEEECCCCCCCCEEEEEEEEEEECCCCEEECCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGISA
2000010212102023111020220323332202001000012232020112104302020100121424302002123333233332122300100021035
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGISA
1MUSTER3d5bV0.4360.9813.679threading_1MFAIVKTGGKQYRVEPGLKLRVEKLDAEPGATVELPVLLL--GGEKTVVGTPVVEGASVVAEVLGHGRGKKILVSKFKAKVQYRRKKGHRQPYTELLIKEIRG
2SPARKS1nkwp0.4300.9713.336threading_2MFAIIQTGGKQYRVSEGDVIRVESLQGEAGDKVELKALFV---GGEQTVFGEDAGKYTVQAEVVEHGRGKKIYIRKYKSGVQYRRRTGHRQNFTAIKILGIQG
3PROSPECT23pyoR0.4360.9812.182threading_3MFAIVKTGGKQYRVEPGLKLRVEKLDAEPGATVELPVLLL--GGEKTVVGTPVVEGASVVAEVLGHGRGKKILVSKFKAKVQYRRKKGHRQPYTELLIKEIRG
4PPA-I3d5bV0.4360.9815.687threading_4MFAIVKTGGKQYRVEPGLKLRVEKLDAEPGATVELPVLLL--GGEKTVVGTPVVEGASVVAEVLGHGRGKKILVSKFKAKVQYRRKKGHRQPYTELLIKEIRG
5HHPRED-l3r8s_R1.0000.9906.115threading_5MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGIS-
6HHPRED-g3r8s_R1.0001.0005.187threading_6MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGISA
7SP31nkwp0.4100.9712.134threading_7MFAIIQTGGKQYRVSEGDVIRVESLQGEAGDKVELKALFVGGE---QTVFGEDAGKYTVQAEVVEHGRGKKIYIRKYKSGVQYRRRTGHRQNFTAIKILGIQG
8SAM-T992j28R1.0001.0005.062threading_8MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGISA
9MUSTER3bboT0.3011.0003.590threading_9IFAVVVIGSRQYIVIPGRWIYTQRLKATVNDKIVLNKVLLVGTKASTYIGTPIVTNAAVHAVVEEQLLDDKVIVFKYKKKKNYRRNIGHRQPITRIKITGITG
10SPARKS1jjua30.1530.6990.739threading_10--------------AAPQVLAVAPARLKIGEE---TQLRVAGTGLG---SDLTL-PEGVAGSVESAGNG--VTVLKL----TATGTPG----PVSLELGGQKV

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.858 to 3d5bV
TM-score=0.656 to native
SCOP code=b.155.1.1
TM-score=0.858 to 3d5bV
TM-score=0.656 to native
SCOP code=b.155.1.1
TM-score=0.913 to 1nkwP
TM-score=0.728 to native
SCOP code=i.1.1.2
TM-score=0.827 to 3d5bV
TM-score=0.638 to native
SCOP code=b.155.1.1
TM-score=0.858 to 3d5bV
TM-score=0.656 to native
SCOP code=b.155.1.1

  Experimental Structure

Download 1vs6R
SCOP code=b.155.1.1