Template-based Modeling Results for RZOD_ECOLI

Submitted Primary Sequence

>Length 60
MRKLKMMLCVMMLPLVVVGCTSKQSVSQCVKPPRPPAWIMQPPPDWQTPLNGIISPSERG
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--------10--------20--------30--------40--------50--------60

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRKLKMMLCVMMLPLVVVGCTSKQSVSQCVKPPRPPAWIMQPPPDWQTPLNGIISPSERG
CHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRKLKMMLCVMMLPLVVVGCTSKQSVSQCVKPPRPPAWIMQPPPDWQTPLNGIISPSERG
443111100100010000003233212301211311011121123131113121232375
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--------10--------20--------30--------40--------50--------60

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRKLKMMLCVMMLPLVVVGCTSKQSVSQCVKPPRPPAWIMQPPPDWQTPLNGIISPSERG
1	MUSTER	2rmsB	0.182	0.917	1.057	threading_1	LSEAEMIALAGLLQM-----SQGEQTPNCVASSLPSTSCPDPVSVSEDPGSGDQSCSGTD
2	PPA-I	2rmsB	0.182	0.917	1.124	threading_2	LSEAEMIALAGLLQM-----SQGEQTPNCVASSLPSTSCPDPVSVSEDPPSGDQSCSGTD
3	MUSTER	1sqqI	0.185	0.900	1.027	threading_3	M----LSVAARSGPFAPVLSATSRGVAGALRPLVQAAVPATSESDLKRSV--LCRESLRG
4	PPA-I	1mpzA	0.250	0.667	1.032	threading_4	-------------------CTTGPCCRQCLKPAGTTCWKTSLTSHYCTG-KSCDCPLYPG
5	MUSTER	1mpzA	0.250	0.667	0.909	threading_5	-------------------CTTGPCCRQCLKPAGTTCWKTSLTSHYCTG-KSCDCPLYPG
6	SPARKS	2kqva	0.228	0.950	0.679	threading_6	VASIITKLNSLNEPLVTMPIGNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSS---
7	PROSPECT2	2rmsB	0.127	0.917	0.570	threading_7	LSEAEMIALAGLLQM-----SQGEQTPNCVASSLPSTSCPDPVSVSEDPGGDQSCSGTDT
8	PPA-I	1sqqI	0.143	0.933	0.926	threading_8	----MLSVAARSGPFAPVLSATSRGVAGALRPLVQAAVPATSESPVLDLKRSVLCESLRG
9	HHPRED-l	3utk_A	0.240	0.417	0.825	threading_9	----------------------------------VPANEQIDLPDDGTILKTAVNVAQK-
10	HHPRED-g	1dbg_A	0.182	0.550	0.772	threading_10	---------------------------QVVASNETLYQVEVKPGGLVQIADGTYKVSNSG

Predicted Tertiary Structure


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TM-score=0.376 to 1fjpA SCOP code=j.37.1.1	TM-score=0.404 to 1ni0C SCOP code=c.52.1.6	TM-score=0.381 to 1ho9A SCOP code=j.94.1.1	TM-score=0.496 to 1sqqI SCOP code=d.184.1.3	TM-score=0.732 to 1mpzA SCOP code=g.20.1.1