Template-based Modeling Results for STPA_ECOLI


  Submitted Primary Sequence

>Length 134
MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEEEQQQRELAERQEKISTWLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDVNGETKTWTGQGRTPKPIAQALAEGKSLDDFLI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEEEQQQRELAERQEKISTWLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDVNGETKTWTGQGRTPKPIAQALAEGKSLDDFLI
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEEEQQQRELAERQEKISTWLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDVNGETKTWTGQGRTPKPIAQALAEGKSLDDFLI
34301201210110210044021310230032032003223433332333213133202200300431202032001211222342234233220202022231323111121310300130133122132123
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEEEQQQRELAERQEKISTWLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDVNGETKTWTGQGRTPKPIAQALAEGKSLDDFLI
1MUSTER1lr1A0.5790.4251.088threading_1-SEALKILNNIRTLRAQARESTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKL----------------------------------------------------------------------------
2SAM-T991hnsA0.7270.3282.311threading_2------------------------------------------------------------------------------------------AQRPAKYSYVDENGETKTWTGQGRTPAVIKKAMDEGKSLDDFLI
3SPARKS1lr1a0.5790.4251.073threading_3-SEALKILNNIRTLRAQARESTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKL----------------------------------------------------------------------------
4PPA-I1hnrA0.7270.3281.368threading_4------------------------------------------------------------------------------------------AQRPAKYSYVDENGETKTWTGQGRTPAVIKKAMDEGKSLDDFLI
5PPA-I1lr1A0.5790.4251.618threading_5-SEALKILNNIRTLRAQARESTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKL----------------------------------------------------------------------------
6HHPRED-l2l93_A0.6510.3213.927threading_6------------------------------------------------------------------------------------------AARPAKYSYVDENGETKTWTGQGRTPAVIKKAMEQGKQLEDFL-
7HHPRED-l3nr7_A0.5430.6044.483threading_7-SEALKILNNIRTLRAQARESTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQYREMLIADGIDPNELLNSMAAA----------------------------------------------------
8HHPRED-g2l93_A0.6590.3283.302threading_8------------------------------------------------------------------------------------------AARPAKYSYVDENGETKTWTGQGRTPAVIKKAMEQGKQLEDFLI
9HHPRED-g3nr7_A0.5430.6043.993threading_9-SEALKILNNIRTLRAQARESTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQYREMLIADGIDPNELLNSMAAA----------------------------------------------------
10SAM-T991hnrA0.7270.3282.311threading_10------------------------------------------------------------------------------------------AQRPAKYSYVDENGETKTWTGQGRTPAVIKKAMDEGKSLDDFLI

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.506 to 1lr1A
SCOP code=a.155.1.1
TM-score=0.594 to 1hnsA
SCOP code=a.155.1.1
TM-score=0.523 to 1lr1A
SCOP code=a.155.1.1
TM-score=0.595 to 1hnrA
SCOP code=a.155.1.1
TM-score=0.506 to 1lr1A
SCOP code=a.155.1.1