Template-based Modeling Results for TDCF_ECOLI

Submitted Primary Sequence

>Length 129
MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLEIEAIAVRSA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLEIEAIAVRSA
CCEEECCCCCCCCCCCCCCEEEECCEEEEEEECCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLEIEAIAVRSA
421212134012110110200101100000010111242120232132102100300220022030202000100000110200120020032003333222000000101401440201010001236
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLEIEAIAVRSA
1	MUSTER	1qu9A	0.730	0.977	4.341	threading_1	-SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARS-VEVARLPKDVKIEIEAIAVRR-
2	SPARKS	3lmea	0.276	0.984	5.028	threading_2	LKIIAPTDKTITPSGTWSIGARAGDFVFIGGMHGTDRVTGKMVDGDEARIRRMFDNMLAAAEAAGATKADAVRLTVFVTDVAKRPVVNKVQKDIWGDG--PYPPRTVLQVPALDQGDIAEIDGTFYAPA
3	PROSPECT2	3r0pA	0.387	0.961	3.266	threading_3	NKAIIHSDNAPAAIGTYSQAVKVNNTVYLSGQIPLDPVTMQLEGDFAVQAHQVFKNLRAVCEAAGGGLRDIVKLNVYLTDLANFPIVNEVMGQYFQA---PYPARAAIGINQLPRASLIEADGIMV--I
4	PPA-I	3r0pA	0.387	0.961	4.957	threading_4	NKAIIHSDNAPAAIGTYSQAVKVNNTVYLSGQIPLDPVTMQLEGDFAVQAHQVFKNLRAVCEAAGGGLRDIVKLNVYLTDLANFPIVNEVMGQYFQA---PYPARAAIGINQLPRASLIEADGIMVI--
5	HHPRED-l	1qu9_A	0.730	0.977	3.182	threading_5	-SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARS-VEVARLPKDVKIEIEAIAVRR-
6	HHPRED-g	1qu9_A	0.730	0.977	2.677	threading_6	-SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARS-VEVARLPKDVKIEIEAIAVRR-
7	SP3	3lmea	0.276	0.984	4.851	threading_7	LKIIAPTDKTITPSGTWSIGARAGDFVFIGGMHGTDRVTGKMVDGDEARIRRMFDNMLAAAEAAGATKADAVRLTVFVTDVAKRPVVNKVQKDIWGDG--PYPPRTVLQVPALDQGDIAEIDGTFYAPA
8	SAM-T99	2dyyD	0.544	0.969	3.883	threading_8	MKEVIFTENAPKPIGPYSQAIKAGNFLFIAGQIPIDPKTGEIKGDIKDQTRQVLENIKAILEAAGYSLNDVIKVTVYLKDMNDFAKMNEVYAEYFGE---SKPARVAVEVSRLPKDVLIEIEAIAYKE-
9	MUSTER	2b33A	0.492	0.977	4.338	threading_9	MKRFVETDKAPKAIGPYSQAVVVGNMMFVSGQIPIDPETGELVGTIEEKTERVLENLKAILEAGGFSLKDVVKVTVFTTSMDYFQRVNEVYSRYFGD---HRPARSFVAVAQLPRNVEIEIEAIAVKEG
10	SPARKS	1qu9a	0.722	0.977	4.587	threading_10	-SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSVE-VARLPKDVKIEIEAIAVRR-

Predicted Tertiary Structure


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TM-score=0.987 to 1qu9A TM-score=0.988 to native SCOP code=d.79.1.1	TM-score=0.941 to 2b33A TM-score=0.929 to native SCOP code=d.79.1.1	TM-score=0.905 to 1qu9A TM-score=0.910 to native SCOP code=d.79.1.1	TM-score=0.934 to 1x25B TM-score=0.924 to native SCOP code=d.79.1.1	TM-score=0.940 to 2b33A TM-score=0.926 to native SCOP code=d.79.1.1

Experimental Structure

Download 2uyjA

SCOP code=d.79.1.1