Template-based Modeling Results for TOLR_ECOLI


  Submitted Primary Sequence

>Length 142
MARARGRGRRDLKSEINIVPLLDVLLVLLLIFMATAPIITQSVEVDLPDATESQAVSSNDNPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKANPKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQPI
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MARARGRGRRDLKSEINIVPLLDVLLVLLLIFMATAPIITQSVEVDLPDATESQAVSSNDNPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKANPKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQPI
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MARARGRGRRDLKSEINIVPLLDVLLVLLLIFMATAPIITQSVEVDLPDATESQAVSSNDNPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKANPKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQPI
5532424244323120300000000000000010002112330313013123232223443320001011202000012433224121320021012214222321000101330312100200210330202100001134
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMARARGRGRRDLKSEINIVPLLDVLLVLLLIFMATAPIITQSVEVDLPDATESQAVSSNDNPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKANPKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQPI
1MUSTER2pfuA0.2110.6691.978threading_1----------------------------------------MDVKVNLPASTSTPQPRPEK--PVYLSVKADNSMFIG-----NDPVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEET
2SPARKS2pfua0.2110.6692.272threading_2----------------------------------------MDVKVNLPASTSTPQPRPE--KPVYLSVKADNSMFIG-----NDPVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEET
3PROSPECT22pfuA0.2210.6691.594threading_3M----------------------------------------DVKVNLPASTSTP--QPRPEKPVYLSVKADNSMFI-----GNDPVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEET
4PPA-I2pfuA0.2110.6692.413threading_4----------------------------------------MDVKVNLPASTSTPQPRPE--KPVYLSVKADNSMFIG-----NDPVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEET
5HHPRED-l2pfu_A0.2130.6624.129threading_5----------------------------------------MDVKVNLPASTSTPQPR--PEKPVYLSVKADNSMFIGN-----DPVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEE-
6HHPRED-g2pfu_A0.2110.6694.223threading_6----------------------------------------MDVKVNLPASTSTPQPR--PEKPVYLSVKADNSMFIGN-----DPVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEET
7SP32pfua0.2110.6692.273threading_7----------------------------------------MDVKVNLPASTSTPQPRPEK--PVYLSVKADNSMFIG-----NDPVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEET
8SAM-T992pfuA0.2150.6552.566threading_8----------------------------------------MDVKVNLPASTSTPQP--RPEKPVYLSVKADNSMFIG-----NDPVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGE--
9MUSTER2jwlA0.5000.5211.362threading_9-----------------------------------------------------------GSVPVILEVAGIGKYAISIGGERQEGLTEEMVTQLSRQEFDKDNNTLFLVGGAKEVPYEEVIKALNLLHLAGIK---------
10SPARKS2jwka0.5000.5211.456threading_10-----------------------------------------------------------GSVPVILEVAGIGKYAISIGGERQEGLTEEMVTQLSRQEFDKDNNTLFLVGGAKEVPYEEVIKALNLLHLAGIK---------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.445 to 2f9wA
SCOP code=c.55.1.13
TM-score=0.464 to 2f9wA
SCOP code=c.55.1.13
TM-score=0.448 to 2nrhB
SCOP code=c.55.1.13
TM-score=0.461 to 2f9wA
SCOP code=c.55.1.13
TM-score=0.448 to 2nrhB
SCOP code=c.55.1.13