Template-based Modeling Results for USPG_ECOLI

Submitted Primary Sequence

>Length 142
MYKTIIMPVDVFEMELSDKAVRHAEFLAQDDGVIHLLHVLPGSASLSLHRFAADVRRFEEHLQHEAQERLQTMVSHFTIDPSRIKQHVRFGSVRDEVNELAEELGADVVVIGSRNPSISTHLLGSNASSVIRHANLPVLVVR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MYKTIIMPVDVFEMELSDKAVRHAEFLAQDDGVIHLLHVLPGSASLSLHRFAADVRRFEEHLQHEAQERLQTMVSHFTIDPSRIKQHVRFGSVRDEVNELAEELGADVVVIGSRNPSISTHLLGSNASSVIRHANLPVLVVR
CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCEEEECCCCCCHHHHEECCHHHHHHHCCCCCEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MYKTIIMPVDVFEMELSDKAVRHAEFLAQDDGVIHLLHVLPGSASLSLHRFAADVRRFEEHLQHEAQERLQTMVSHFTIDPSRIKQHVRFGSVRDEVNELAEELGADVVVIGSRNPSISTHLLGSNASSVIRHANLPVLVVR
5221000001113231012002101200332010000000211111113312221320122022202310220023033432202010220102210020034110000000022110120000010100132130211112
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MYKTIIMPVDVFEMELSDKAVRHAEFLAQDDGVIHLLHVLPGSASLSLHRFAADVRRFEEHLQHEAQERLQTMVSHFTIDPSRIKQHVRFGSVRDEVNELAEELGADVVVIGSRNPSISTHLLGSNASSVIRHANLPVLVVR
1	MUSTER	1mjhB	0.285	0.965	2.285	threading_1	MYKKILYPTDFS--ETAEIALKHVKAFKTKAEEVILLHVIDEREIKSVEEF---ENELKNKLTEEAKNKMENIKKELEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGKNLKEILLGSVTENVIKKSNKPVLVVK
2	SPARKS	3hgma	0.266	0.979	3.146	threading_2	MFNRIMVPVDGS--KGAVKALEKGVGLQQLGAELYILCVFKHHSLLEASLSMARPEQLDDALKDYATEIAVQAKTRATELGVPVRAFVKGGRPSRTIVRFARKRECDLVVIGAQGTNDKSLLLGSVAQRVAGSAHCPVLVV-
3	PROSPECT2	2dumA	0.255	0.965	2.499	threading_3	MFRKVLFPTDFS--EGAYRAVEVFEKRNKEVGEVILLHVIDEGTLEELMELKDIKEKLKEEASRKLQEKAEEVKRA--FRAKNVRTIIRFGIPWDEIVKVAEEENVSLIILPSRGKL-SHEFLGSTVMRVLRKTKKPVLIIK
4	PPA-I	2z3vA	0.222	0.951	3.000	threading_4	MFKTILLAYDGS--EHARRAAEVAKAEAEAGARLIVVHAYEPVPDYLGEPF---FEEALRRRLERAEGVLEEARALTGVPKE--DALLLEGVPAEAILQAARAEKADLIVMGTRGLALGSLFLGSQSQRVVAEAPCPVLLVR
5	HHPRED-l	1mjh_A	0.278	0.937	3.316	threading_5	MYKKILYPTDFS--ETAEIALKHVKAFKTKAEEVILLHVIDEREIK------EFENELKNKLTEEAKNKMENIKKELEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGKTLKEILLGSVTENVIKKSNKPVLVV-
6	HHPRED-g	1mjh_A	0.274	0.951	2.759	threading_6	MYKKILYPTDFSET--AEIALKHVKAFKTKAEEVILLHVIDEREIK-----EEFENELKNKLTEEAKNKMENIKKELEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGKNLKEILLGSVTENVIKKSNKPVLVVK
7	SP3	3s3ta	0.230	0.979	3.414	threading_7	RYTNILVPVDSS--DAAQAAFTEAVNIAQHQANLTALYVVDDSAYHTP-ALDPVLSELLDAEAAHAKDARQRQQFVATTSAPNLKTEISYGIPKHTIEDYAKQPEIDLIVLGATGTSPHRVAVGSTTSYVVDHAPCNVIVIR
8	SAM-T99	1mjhB	0.277	0.965	3.103	threading_8	MYKKILYPTDFSETAE--IALKHVKAFKTKAEEVILLHVIDEREIKSV---EEFENELKNKLTEEAKNKMENIKKELEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGKNLKEILLGSVTENVIKKSNKPVLVVK
9	MUSTER	2dumC	0.268	0.972	2.222	threading_9	MFRKVLFPTDFS--EGAYRAVEVFEKRNKMEGEVILLHVIDEGTLEELMDLKDIKEKLKEEASRKLQEKAEEVKRAFR--AKNVRTIIRFGIPWDEIVKVAEEENVSLIILPSRGKSLSHEFLGSTVMRVLRKTKKPVLIIK
10	SPARKS	3s3ta	0.230	0.979	3.075	threading_10	RYTNILVPVDSS--DAAQAAFTEAVNIAQHQANLTALYVVDDSAYHT-PALDPVLSELLDAEAAHAKDARQRQQFVATTSAPNLKTEISYGIPKHTIEDYAKQHEIDLIVLGATGTSPHRVAVGSTTSYVVDHAPCNVIVIR

Predicted Tertiary Structure


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TM-score=0.933 to 1mjhB SCOP code=c.26.2.4	TM-score=0.942 to 1mjhB SCOP code=c.26.2.4	TM-score=0.819 to 2z3vA SCOP code=c.26.2.4	TM-score=0.798 to 1mjhB SCOP code=c.26.2.4	TM-score=0.941 to 2z3vA SCOP code=c.26.2.4