Template-based Modeling Results for YBAQ_ECOLI


  Submitted Primary Sequence

>Length 113
MKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREERAKKVA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREERAKKVA
CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHCCHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREERAKKVA
55333342100010012100421402022003303113300210022223022300120030030111000001100101212332323310230220131113333323424
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREERAKKVA
1MUSTER2ebyA1.0000.9033.288threading_1------KPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREER-----
2SPARKS2ebya1.0000.9033.672threading_2------KPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREER-----
3PROSPECT22ebyA1.0000.9031.815threading_3------KPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREER-----
4PPA-I2ebyA1.0000.9034.670threading_4------KPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREER-----
5HHPRED-l2eby_A1.0000.9033.568threading_5------KPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREER-----
6HHPRED-g2eby_A1.0000.9034.160threading_6------KPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREER-----
7SP32ebya1.0000.9033.809threading_7------KPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREER-----
8SAM-T993trbA0.4040.7883.915threading_8------RPIHPGEILAEE-LGFLDKSANQLAKHLAIPTNRVTAILNGARSITADTALRLAKFFGTTPEFWLNLQDAYDIKALKKSGKKIEKEVTPY-----------------
9MUSTER3cecA0.3110.7962.586threading_9V-----RPIHPGEVIADILDDL-DINTANFAEILGVSNQTIQEVINGQRSITVDIAIRLGKALGNGPRLWLNLQQKVDLWYALQSH--KEEYEQVTLV---------------
10SPARKS3ceca0.3220.7963.157threading_10-----VRPIHPGEVIADILDD-LDINTANFAEILGVSNQTIQEVINGQRSITVDIAIRLGKALGNGPRLWLNLQQKVDLWYALQSH--KEEYEQVTLV---------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.742 to 2ictA
TM-score=0.872 to native
SCOP code=a.35.1.3
TM-score=0.742 to 2ictA
TM-score=0.872 to native
SCOP code=a.35.1.3
TM-score=0.742 to 2ictA
TM-score=0.872 to native
SCOP code=a.35.1.3
TM-score=0.742 to 2ictA
TM-score=0.872 to native
SCOP code=a.35.1.3
TM-score=0.742 to 2ictA
TM-score=0.872 to native
SCOP code=a.35.1.3

  Experimental Structure

Download 2ebyA
SCOP code=a.35.1.3