Template-based Modeling Results for YDCH_ECOLI


  Submitted Primary Sequence

>Length 74
MFPEYRDLISRLKNENPRFMSLFDKHNKLDHEIARKEGSDGRGYNAEVVRMKKQKLQLKDEMLKILQQESVKEV
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--------10--------20--------30--------40--------50--------60--------70
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFPEYRDLISRLKNENPRFMSLFDKHNKLDHEIARKEGSDGRGYNAEVVRMKKQKLQLKDEMLKILQQESVKEV
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MFPEYRDLISRLKNENPRFMSLFDKHNKLDHEIARKEGSDGRGYNAEVVRMKKQKLQLKDEMLKILQQESVKEV
42230130023024312200100330140021014132332312323123023211201220030023224434
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--------10--------20--------30--------40--------50--------60--------70
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMFPEYRDLISRLKNENPRFMSLFDKHNKLDHEIARKEGSDGRGYNAEVVRMKKQKLQLKDEMLKILQQESVKEV
1MUSTER1zhcA0.4720.9733.256threading_1MFHEFRDEISVLKANNPHFDKIFEKHNQLDDDIKTAEQQ--NASDAEVSHMKKQKLKLKDEIHSMIIEYREKQK
2SPARKS1zhca0.4720.9733.443threading_2MFHEFRDEISVLKANNPHFDKIFEKHNQLDDDIKTAEQQ--NASDAEVSHMKKQKLKLKDEIHSMIIEYREKQK
3PROSPECT21zhcA0.4720.9731.412threading_3MFHEFRDEISVLKANNPHFDKIFEKHNQLDDDIKTAEQQ--NASDAEVSHMKKQKLKLKDEIHSMIIEYREKRA
4PPA-I1zhcA0.4720.9736.971threading_4MFHEFRDEISVLKANNPHFDKIFEKHNQLDDDIKTAEQ--QNASDAEVSHMKKQKLKLKDEIHSMIIEYREKQK
5HHPRED-l1zhc_A0.4790.9596.802threading_5MFHEFRDEISVLKANNPHFDKIFEKHNQLDDDIKTAEQ--QNASDAEVSHMKKQKLKLKDEIHSMIIEYREKQ-
6HHPRED-g1zhc_A0.4720.9734.934threading_6MFHEFRDEISVLKANNPHFDKIFEKHNQLDDDIKTAEQ--QNASDAEVSHMKKQKLKLKDEIHSMIIEYREKQK
7SP31zhca0.4720.9731.933threading_7MFHEFRDEISVLKANNPHFDKIFEKHNQLDDDIKTAEQQ--NASDAEVSHMKKQKLKLKDEIHSMIIEYREKQK
8SAM-T991zhcA0.4850.9193.838threading_8MFHEFRDEISVLKANNPHFDKIFEKHNQLDDDIKTAEQQNA--SDAEVSHMKKQKLKLKDEIHSMIIEYR----
9MUSTER3d5d20.1430.9460.960threading_9MLSEVRKQLEEARKSPVELEKLVREKKRELMELRFQASIGQLSQNHKIRDLKRQIARLLTVLNEKRRQNA----
10SPARKS2wdi20.1290.9461.035threading_10KLSEVRKQLEEARKSPVELEKLVREKKRELMELRFQASIGQLSQNHKIRDLKRQIARLLTVLNEKRRQNA----

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.650 to 2ibzH
SCOP code=f.28.1.1
TM-score=0.659 to 1lrzA
SCOP code=a.2.7.4
TM-score=0.659 to 1lrzA
SCOP code=a.2.7.4
TM-score=0.630 to 1fyjA
SCOP code=a.16.1.3
TM-score=0.637 to 1lrzA
SCOP code=a.2.7.4