Template-based Modeling Results for YEAR_ECOLI


  Submitted Primary Sequence

>Length 119
MLQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFVAPEVLMEGAQQRKVIHNGK
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFVAPEVLMEGAQQRKVIHNGK
CCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCEEECCCCEEEEEECCCCEEEEEEEEECHHHHHHHHCCCCCCCCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MLQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFVAPEVLMEGAQQRKVIHNGK
55422311000220122233000100033033311320000100001010200011344323111000123221000203100101001420100010001111002111323223434
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMLQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFVAPEVLMEGAQQRKVIHNGK
1MUSTER3bb6C0.9260.9083.777threading_1-LQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSV--GAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEA-TDDTYFNIDFFVAPE-------VLEGAQQRK
2SPARKS3bb6a0.9520.8824.496threading_2-LQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSVH-GAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIE-ATDDTYFNIDFFVAPEVLEGA-----------
3PROSPECT23bb6A0.9430.8821.985threading_3L-QIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSV-HGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIE-ATDDTYFNIDFFVAPE-----------VLEGA
4PPA-I3bb6C0.9170.9168.610threading_4-LQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSVH-GAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEA-TDDTYFNIDFFVAPE-------VLEGAQQRK
5HHPRED-l3bb6_A1.0000.8827.316threading_5-LQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSV-HGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEA-TDDTYFNIDFFVAPEVL-EGA----------
6HHPRED-g3bb6_A1.0000.8826.514threading_6-LQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSV-HGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEA-TDDTYFNIDFFVAPEVL-EGA----------
7SP33bb6a0.9620.8824.358threading_7-LQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSVH-GAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIE-ATDDTYFNIDFFVAPE-VLEGA----------
8SAM-T993m70A0.2390.9165.455threading_8----KNELICYKQ-PVWTKDNLPQ-FQEKH---NTKVGTWGKLTVLKGKLKFY-ELTENGDVIAEHIFTPESHIPFVEPQAWHRVEALSDDLECTLGFYCKKEDYFSKKYNTTAIHGDV
9MUSTER3dl3E0.3870.8913.641threading_9HLRIPKNWTIQRSTPFFTKDNVPEALLTHH---NTAVDVFGQICV--GVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIEL-SDDAQFNINFWSDQD-KSGKKFNTK------
10SPARKS3dl3a0.4110.7984.184threading_10--RIPKNWTIQRSTPFFTKDNVPEALLTHH---NTAVDVFGQICVE-GVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIEL-SDDAQFNINFWSDQ-----------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.885 to 3bb6C
TM-score=0.924 to native
SCOP code=b.82.2.13
TM-score=0.882 to 3bb6C
TM-score=0.920 to native
SCOP code=b.82.2.13
TM-score=0.840 to 3bb6C
TM-score=0.875 to native
SCOP code=b.82.2.13
TM-score=0.835 to 3bb6C
TM-score=0.870 to native
SCOP code=b.82.2.13
TM-score=0.887 to 3bb6C
TM-score=0.926 to native
SCOP code=b.82.2.13

  Experimental Structure

Download 3bb6C
SCOP code=b.82.2.13