Template-based Modeling Results for YEDF_ECOLI


  Submitted Primary Sequence

>Length 77
MKNIVPDYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVVSDCPQSINNIPLDARNHGYTVLDIQQDGPTIRYLIQK
12345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKNIVPDYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVVSDCPQSINNIPLDARNHGYTVLDIQQDGPTIRYLIQK
CCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEECCEEEEEEEC
12345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKNIVPDYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVVSDCPQSINNIPLDARNHGYTVLDIQQDGPTIRYLIQK
55422121201021220110000003103413402100000113301200120044231100112223420201013
12345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKNIVPDYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVVSDCPQSINNIPLDARNHGYTVLDIQQDGPTIRYLIQK
1MUSTER1je3A1.0001.0003.190threading_1MKNIVPDYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVVSDCPQSINNIPLDARNHGYTVLDIQQDGPTIRYLIQK
2SPARKS1dcja0.2991.0003.510threading_2MTDLSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRK
3PROSPECT21dcja0.2991.0001.614threading_3MTDLSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRK
4PPA-I1dcjA0.2991.0005.803threading_4MTDLSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRK
5HHPRED-l1jdq_A0.3820.9874.504threading_5MAKYQVTKTLDVRGEVCPVPDVETKRALQNMKPGEILEVWIDYPMSKERIPETVKKLGHEVLEIEEVGSEWKIYIK-
6HHPRED-g1jdq_A0.3771.0003.666threading_6MAKYQVTKTLDVRGEVCPVPDVETKRALQNMKPGEILEVWIDYPMSKERIPETVKKLGHEVLEIEEVGSEWKIYIKV
7SP31dcja0.2991.0003.698threading_7MTDLSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRK
8SAM-T991dcjA0.2991.0003.644threading_8MTDLFPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRK
9MUSTER1dcjA0.2991.0003.094threading_9MTDLSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRK
10SPARKS1pava0.2240.9873.344threading_10-MDVKPDRVIDARGSYCPGPLMELIKAYKQAKVGEVISVYSTDAGTKKDAPAWIQKSGQELVGVFDRNGYYEIVMKK

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.879 to 1je3A
SCOP code=d.68.3.3
TM-score=0.956 to 1dcjA
SCOP code=d.68.3.3
TM-score=0.956 to 1dcjA
SCOP code=d.68.3.3
TM-score=0.956 to 1dcjA
SCOP code=d.68.3.3
TM-score=0.956 to 1dcjA
SCOP code=d.68.3.3