Template-based Modeling Results for YGCO_ECOLI

Submitted Primary Sequence

>Length 86
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGNLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
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--------10--------20--------30--------40--------50--------60--------70--------80

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGNLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
CCCCCCCCCCCCCCEEEECCCCCCCCCCHHHEECCCCEEEECCCCCEEEECCCCCCCCCCEEECCCCCCEEEECCCCCCCCEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGNLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
54223212321310000022212412122001001010010233130200031011001010102321202020122220110224
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGNLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
1	MUSTER	2gmhA	0.253	0.965	1.917	threading_1	VALS-GTNHEHDQPHLTLKDDNLSIYDGPEQRFCPAGVYEFVPLERLQINAQNCVHCKTCDIKDPS-QNINWVVPEGGGGPAY-NG
2	SPARKS	2gmha	0.265	0.965	3.642	threading_2	VALS-GTNHEHDQPHLTLKDDSLSIYDGPEQRFCPAGVYEFVPLERLQINAQNCVHCKTCDIKD-PSQNINWVVPEGGGGPAY-NG
3	PROSPECT2	2fug9	0.186	1.000	0.654	threading_3	YPDAPVALKPRFHGRHVLTGLEKCIGCSLCAAACPAYAIYVEPAENYEINMLRCIFCGLCEEACPTGAIVLGYDFEMAVKVGYVVG
4	PPA-I	1clfA	0.273	0.640	3.329	threading_4	--------------AYKIADSCVSCGA--CASECPVNAISQ-GDSIFVIDADTCIDCGNCANVCPVGAPVQE--------------
5	HHPRED-l	2gmh_A	0.214	0.977	2.330	threading_5	VALSGTNHEHDQPAHLTLKDDSVRNLDGPEQRFCPAGVYEFVQGFRLQINAQNCVHCKTCDIKDPSQNIN-WVVPEGGGGPAYNG-
6	HHPRED-g	2gmh_A	0.262	0.977	8.540	threading_6	VALS-GTNHEHDQPHLTLKDDSVPIYDGPEQRFCPAGVYEFVPQFRLQINAQNCVHCKTCDIK-DPSQNINWVVPEGGGGPAYNGM
7	SP3	2gmha	0.265	0.965	3.724	threading_7	VALS-GTNHEHDQPHLTLKDDSLSIYDGPEQRFCPAGVYEFVPLERLQINAQNCVHCKTCDIKD-PSQNINWVVPEGGGGPAY-NG
8	SAM-T99	2gmhA	0.214	0.977	3.062	threading_8	-ALSGTNHEHDQPAHLTLKDDNLSIYDGPEQRFCPAGVYEFVPGFRLQINAQNCVHCKTCDIKDPSQN-INWVVPEGGGGPAYNGM
9	MUSTER	1h98A	0.179	0.779	1.143	threading_9	-------------PHVI--EPCIGVKDQSCVEVCPVECIYDGGDQ-FYIHPEECIDCGACVPACPVNAYPEEDVPEQWK--KL-AG
10	SPARKS	1r27b	0.129	0.988	1.172	threading_10	DNIQKAMYSQFENTFMYLPRLCEHCLNPACVATCPSGIYKREEDGIVLIDQDKCRGWRMCITGC-PYKKIYFNWKSGFCYPRIEAG

Predicted Tertiary Structure


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TM-score=0.605 to 1jb0C SCOP code=d.58.1.2	TM-score=0.850 to 1bqxA SCOP code=d.58.1.2	TM-score=0.589 to 1jb0C SCOP code=d.58.1.2	TM-score=0.639 to 1durA SCOP code=d.58.1.1	TM-score=0.778 to 1clfA SCOP code=d.58.1.1