Template-based Modeling Results for YIDD_ECOLI

Submitted Primary Sequence

>Length 85
MAPPLSPGSRVLIALIRVYQRLISPLLGPHCRFTPTCSSYGIEALRRFGVIKGSWLTVKRVLKCHPLHPGGDDPVPPGPFDTREH
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--------10--------20--------30--------40--------50--------60--------70--------80

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAPPLSPGSRVLIALIRVYQRLISPLLGPHCRFTPTCSSYGIEALRRFGVIKGSWLTVKRVLKCHPLHPGGDDPVPPGPFDTREH
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAPPLSPGSRVLIALIRVYQRLISPLLGPHCRFTPTCSSYGIEALRRFGVIKGSWLTVKRVLKCHPLHPGGDDPVPPGPFDTREH
5532221002000000200120002111120311010010001004300001000000100020011031011101333233448
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAPPLSPGSRVLIALIRVYQRLISPLLGPHCRFTPTCSSYGIEALRRFGVIKGSWLTVKRVLKCHPLHPGGDDPVPPGPFDTREH
1	PPA-I	2ctoA	0.084	0.976	1.324	threading_1	RKASRNAYYFFVQEKIPELRRRGLPVARVADAIPYCSSDWALLREEEKEKYAEMAREWRAAQGKDPGPSEKQKPVFTSGPSSG--
2	PPA-I	1r02A	0.303	0.388	1.175	threading_2	-------------------------QPLPDCCRQKTCSCRLYELLHGAGNHAAGILTL---------------------------
3	PPA-I	1wsoA	0.312	0.376	1.155	threading_3	--------------------------PLPDCCRQKTCSCRLYELLHGAGNHAAGILTL---------------------------
4	PPA-I	2fs1A	0.185	0.635	1.011	threading_4	AVDANSLAQAKEAAIKELKQYGIG--------------DYYIKLINNAKTVEGVESLKNEILKALPTE-----------------
5	MUSTER	2okxA	0.157	0.976	0.713	threading_5	RSDVYSMQTQVVAYLCGEREAVIESSPPPAFIGSPFMSFFYYEALEKAGRQTLMLDDIRRNYG--QMLRYDATTCWEMYPNFAEN
6	SPARKS	2kc7a	0.099	0.953	0.902	threading_6	MDQLKTIKELIIENALQALEEFLQ-TEPVG---KDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQDMYNQLEHHHHHH
7	PROSPECT2	1ujoA	0.131	0.988	0.634	threading_7	PDRGRLGFQVWLVILSKLVNSLYPEGSKPVKVPENPPSAQFLKAAEDYGVQRTLMALGSLAVTKNDGNYRG-DPNWFMKSGPSSG
8	PPA-I	2kj9A	0.094	1.000	0.961	threading_8	FATKTTWSEDYQRSVWTRLETYLFPDIGNKAELDTGDLLVPIKKIEKLGYLEIAMRVKQYATAIMRYKMIRFNPVQKLEHHHHHH
9	HHPRED-l	1as5_A	0.333	0.247	0.746	threading_9	---------------------H--CCLYGKCRRY-GCSSASCC--QR--------------------------------------
10	HHPRED-g	2vgq_A	0.099	0.953	0.704	threading_10	RQTVDEALKDAQTNSEDKTYKYICRNFSNFCNVDVPCTADRLRACTLSGNRDTLWHLFNTLQRR----PGWVEYFIAALRGCELV

Predicted Tertiary Structure


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TM-score=0.366 to 2aqeA SCOP code=a.4.1.18	TM-score=0.569 to 1gt0D SCOP code=a.21.1.1	TM-score=0.522 to 1r02A SCOP code=j.6.1.1	TM-score=0.504 to 1wsoA SCOP code=j.6.1.1	TM-score=0.606 to 2j5yA SCOP code=a.8.1.2