Template-based Modeling Results for YJEI_ECOLI


  Submitted Primary Sequence

>Length 117
MHVKYLAGIVGAALLMAGCSSSNELSAAGQSVRIVDEQPGAECQLIGTATGKQSNWLSGQHGEEGGSMRGAANDLRNQAAAMGGNVIYGISSPSQGMLSSFVPTDSQIIGQVYKCPN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MHVKYLAGIVGAALLMAGCSSSNELSAAGQSVRIVDEQPGAECQLIGTATGKQSNWLSGQHGEEGGSMRGAANDLRNQAAAMGGNVIYGISSPSQGMLSSFVPTDSQIIGQVYKCPN
CCEEEHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MHVKYLAGIVGAALLMAGCSSSNELSAAGQSVRIVDEQPGAECQLIGTATGKQSNWLSGQHGEEGGSMRGAANDLRNQAAAMGGNVIYGISSPSQGMLSSFVPTDSQIIGQVYKCPN
541100000000000010011223222211102012223133010102010231110100103211102000110111003110100000022222122222221020101012036
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMHVKYLAGIVGAALLMAGCSSSNELSAAGQSVRIVDEQPGAECQLIGTATGKQSNWLSGQHGEEGGSMRGAANDLRNQAAAMGGNVIYGISSPSQGMLSSFVPTDSQIIGQVYKCPN
1PPA-I2y1bA0.1850.6921.173threading_1-----------------------------TPVRIYTNAVGKPFRDLGEVSG-----DSCQASNQDSPIPTARKRMQINASKMKANAVLLHSCEVTSGTPGCYR-QAVCIGSALNIT-
2HHPRED-l2y1b_A0.1710.7011.645threading_2-----------------------------TPVRIYTNLVGKPFRDLGEVSGDSCQ--ASN-QDSPPSIPTARKRMQINASKMKANAVLLHSC--EVTSGPGCYRQAVCIGSALNIT-
3HHPRED-g2y1b_A0.1880.6841.783threading_3-----------------------------TPVRIYTNLVGKPFRDLGEVSGDSCQ---ASNQDSPPSIPTARKRMQINASKMKANAVLLHSC----EVTSGCYRQAVCIGSALNIT-
4PPA-I1wn9A0.1070.9571.018threading_4GRAAPRVSLEALKAALGGLKL-----SEAKVYLITDWQDKRDQARYALLLHTGKKLVPDAFGPAFPGGEEALSELVGLLLAQGARRFYEAVVSPGETALLDLPPEELLKRVAIANPT
5HHPRED-l1y2i_A0.1980.6921.299threading_5--------------------------------QFSTTLEGLTVEYCGVVTGEAILIVGGRSGAYEKELEIAFEELGSQARALGADAVVGIDIDYETVGQNGS---VSVSGTAVKTR-
6HHPRED-g1vr4_A0.1630.6841.189threading_6--------------------------------MIVTTSQGKIIEYIDIVNGEAIDVVGGSYEKLKEARDIAMDEMKELAKQKGANAIVGVDV---DYEVVRGMLMVAVSGTAVRI--
7HHPRED-l1vr4_A0.1590.7011.291threading_7-------------------------------MIVTTGIQGKEIEYIDIVNGEAIDVVGGRAGSLKEARDIAMDEMKELAKQKGANAIVGVDVDYEVVRDG--MLMVAVSGTAVRI--
8HHPRED-g3qkb_A0.1670.7181.099threading_8-----------------------------QG-FITTEGINAGYTIKDVVEATSSL-LADKYN-FDQLFDEAKQKLKKKADLLEGDGIIGLKYNTEVVEVNGAFLVVHGYGTVILID-
9HHPRED-l3qkb_A0.1650.7261.279threading_9----------------------------FQG-FITTEGINAGYTIKDVVEATSSL-LADKYN-FDQLFDEAKQKLKKKADLLEGDGIIGLKYNTEVVEVNGKFLVVHGYGTVILID-
10HHPRED-g1y2i_A0.2000.6841.091threading_10--------------------------------QFSTTPEGLTVEYCGVVTGEAILIVGGRSGAYEKEREIAFEELGSQARALGADAVVGIDI---DYETVGQN--VSVSGTAVKTRR

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.591 to 1vr4A
SCOP code=d.230.5.1
TM-score=0.582 to 1vr4A
SCOP code=d.230.5.1
TM-score=0.574 to 1y2iA
SCOP code=d.230.5.1
TM-score=0.915 to 1wn9A
SCOP code=d.319.1.1
TM-score=0.625 to 1y2iA
SCOP code=d.230.5.1