Template-based Modeling Results for YMJD_ECOLI


  Submitted Primary Sequence

>Length 21
MKHIQIRNSDMDWHIAANNLG
123456789012345678901
--------10--------20
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKHIQIRNSDMDWHIAANNLG
CCCEEEECCCCCHHHHHCCCC
123456789012345678901
--------10--------20
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKHIQIRNSDMDWHIAANNLG
553110211201110012224
123456789012345678901
--------10--------20
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKHIQIRNSDMDWHIAANNLG
1SPARKS1c9la10.3331.0001.509threading_1IPYIVLQNPDLALRMAVNNLA
2PPA-I2k04B0.2381.0001.056threading_2MEGISIYTSDNYTEMGSGDYD
3SP31c9la10.3331.0001.300threading_3IPYIVLQNPDLALRMAVNNLA
4SPARKS2i32e0.2000.9521.483threading_4KKQVETRTADGRRRITPLCI-
5PPA-I1sghB0.2381.0001.027threading_5QKRSSKRAPQMDWSKKNELFS
6SP32i32e0.2000.9521.291threading_6KKQVETRTADGRRRITPLCI-
7SPARKS1lqvc0.2110.9051.254threading_7LRHSSLRCIICDFAKIFQN--
8SP32npic0.3890.8571.089threading_8---IQSRNSDSQWAAFKDDEI
9SPARKS2npic0.3890.8571.060threading_9---IQSRNSDSQWAFKDDEIT
10SP33ffdp0.2940.8101.008threading_10--SIQLRRRFFLHHLIAEI--

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.396 to 5znfA
SCOP code=g.37.1.1
TM-score=0.207 to 1xtgB
SCOP code=h.1.15.1
TM-score=0.396 to 5znfA
SCOP code=g.37.1.1
TM-score=0.350 to 1zr7A
SCOP code=b.72.1.1
TM-score=0.341 to 1g2yA
SCOP code=a.34.2.1