Template-based Modeling Results for YOBA_ECOLI

Submitted Primary Sequence

>Length 124
MASTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAAPQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYTVDWHVVSVDGHKTKGHYTFSVK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MASTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAAPQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYTVDWHVVSVDGHKTKGHYTFSVK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCEECCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MASTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAAPQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYTVDWHVVSVDGHKTKGHYTFSVK
4421010011000000000000001002202421122312023012101010122032111002001242331322202123333220001023214302000100000211141412010213
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MASTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAAPQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYTVDWHVVSVDGHKTKGHYTFSVK
1	MUSTER	1lyqB	0.408	0.790	2.587	threading_1	-------------------------AHPELKSSVPQADSAV-AAPEKIQLNFSENLTVKFSGAKLTMTGMKGMSSHSPMPVAADPKSMVIIPREPLPAGTYRVDWRAVSSDTHPITGNYTFTVK
2	SPARKS	1m42a	0.402	0.782	2.745	threading_2	--------------------------HPKLVSSTPAEGSEG-AAPAKIELHFSENLVTQFSGAKLVMTAMPGMEHSPAVSGGGDPKTMVITPASPLTAGTYKVDWRAVSSDTHPITGSVTFKVK
3	PROSPECT2	1m42a	0.392	0.782	1.767	threading_3	--------------------------HPKLVSSTPAEGSEG-AAPAKIELHFSENLVTQFSGAKLVMTAMPGMEHSPMAVKGGDPKTMVITPASPLTAGTYKVDWRAVSSDTHPITGSVTFKVK
4	PPA-I	1lyqB	0.408	0.790	3.249	threading_4	-------------------------AHPELKSSVPQADSAV-AAPEKIQLNFSENLTVKFSGAKLTMTGMKGMSSHSPMPVGADPKSMVIIPREPLPAGTYRVDWRAVSSDTHPITGNYTFTVK
5	HHPRED-l	1lyq_A	0.404	0.758	5.563	threading_5	-------------------------AHPELKSSVPQADSAVA-APEKIQLNFSENLTVKFSGAKLTMTGMK---SHSPMAPGADPKSMVIIPREPLPAGTYRVDWRAVSSDTHPITGNYTFTV-
6	HHPRED-g	1lyq_A	0.421	0.766	4.704	threading_6	-------------------------AHPELKSSVPQADSAV-AAPEKIQLNFSENLTVKFSGAKLTMTGMK---SHSPMPPGADPKSMVIIPREPLPAGTYRVDWRAVSSDTHPITGNYTFTVK
7	SP3	1m42a	0.402	0.782	2.545	threading_7	--------------------------HPKLVSSTPAEGSEG-AAPAKIELHFSENLVTQFSGAKLVMTAMPGMEHSPAVSGGGDPKTMVITPASPLTAGTYKVDWRAVSSDTHPITGSVTFKVK
8	SAM-T99	1lyqB	0.398	0.790	4.120	threading_8	-------------------------AHPELKSSVPQADSAVA-APEKIQLNFSENLTVKFSGAKLTMSSHSPMPVAAKVAPGADPKSMVIIPREPLPAGTYRVDWRAVSSDTHPITGNYTFTVK
9	MUSTER	1ot4A	0.402	0.782	2.507	threading_9	--------------------------HPKLVSSTPAEGSEG-AAPAKIELHFSENLVTQFSGAKLVMTAMPGMEHSPAVSGGGDPKTMVITPASPLTAGTYKVDWRAVSSDTHPITGSVTFKVK
10	SPARKS	3c12a	0.188	0.815	0.740	threading_10	---------------------DQVLKGAALVGHNPSAQVAIDATGSAKGVVAATS--AGFVNFEITDANGTFVKQLSVPASAAGEVSFAWDGTDRMAAGKYGITATQTDTAGAKSKLATYVDAP

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.784 to 1lyqB SCOP code=b.1.18.17	TM-score=0.762 to 1lyqB SCOP code=b.1.18.17	TM-score=0.678 to 1ot4A SCOP code=b.1.18.17	TM-score=0.726 to 1ot4A SCOP code=b.1.18.17	TM-score=0.777 to 1lyqB SCOP code=b.1.18.17