Template-based Modeling Results for YQCA_ECOLI

Submitted Primary Sequence

>Length 149
MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDWLPYQDKYVLVVTSTTGQGDLPDSIVPLFQGIKDSLGFQPNLRYGVIALGDSSYVNFCNGGKQFDALLQEQSAQRVGEMLLIDASENPEPETESNPWVEQWGTLLS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDWLPYQDKYVLVVTSTTGQGDLPDSIVPLFQGIKDSLGFQPNLRYGVIALGDSSYVNFCNGGKQFDALLQEQSAQRVGEMLLIDASENPEPETESNPWVEQWGTLLS
CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDWLPYQDKYVLVVTSTTGQGDLPDSIVPLFQGIKDSLGFQPNLRYGVIALGDSSYVNFCNGGKQFDALLQEQSAQRVGEMLLIDASENPEPETESNPWVEQWGTLLS
54200000002101021002201210242214020011230232203332000000001131210310120020034222113302000000011202100200210020044121210021020112332312210220022003114
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDWLPYQDKYVLVVTSTTGQGDLPDSIVPLFQGIKDSLGFQPNLRYGVIALGDSSYVNFCNGGKQFDALLQEQSAQRVGEMLLIDASENPEPETESNPWVEQWGTLLS
1	MUSTER	1ykgA	0.275	0.953	3.424	threading_1	---ITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYKFKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVE----YQAAASEWRARVVDALK
2	SPARKS	1ja1a2	0.218	0.987	3.454	threading_2	GRNIIVFYGSQTGTAEEFANRLSKDAHRYGMRGMSADPEEYDLADLIDKSLVVFCMATYGEGDPTDNAQDFYDWLQETDVDLTGVKFAVFGLGNKTYEHFNAMGKYVDQRLEQLGAQRIFELGLGDDDG--NLEEDFITWREQFWPAVC
3	PROSPECT2	2hnaA	0.286	0.987	2.724	threading_3	MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGPLLE--DLPASGIWLVISSTHGAGDIPDNLSPFYEALQEQKPDLSAVRFGAIGIGSREYDTFCGAIDKLEAELKNSGAKQTGETLKINILDHDIPEDPAEEWLGSWVNLLK
4	PPA-I	1ykgA	0.275	0.953	4.411	threading_4	---ITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYKFKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVE----YQAAASEWRARVVDALK
5	HHPRED-l	1ykg_A	0.284	0.946	3.179	threading_5	---ITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYKFKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADV----EYQAAASEWRARVVDAL-
6	HHPRED-g	1tll_A	0.264	0.966	3.212	threading_6	-AKATILYATETGKSQAYAKTLCEIF-KHAFDAKAMSMEEYDIVHLEHEALVLVVTSTFGNGDPPENGEKFGCALMEMR-PLANVRFSVFGLGSRAYPHFCAFGHAVDTLLEELGGERILKMREGDELC--GQEEAFRTWAKKVFKAAC
7	SP3	1ja1a2	0.218	0.987	3.495	threading_7	GRNIIVFYGSQTGTAEEFANRLSKDAHRYGMRGMSADPEEYDLADLIDKSLVVFCMATYGEGDPTDNAQDFYDWLQETDVDLTGVKFAVFGLGNKTYEHFNAMGKYVDQRLEQLGAQRIFELGLGDDDG--NLEEDFITWREQFWPAVC
8	SAM-T99	2hnaA	0.286	0.987	3.994	threading_8	MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGPLLE--DLPASGIWLVISSTHGAGDIPDNLSPFYEALQEQKPDLSAVRFGAIGIGSREYDTFCGAIDKLEAELKNSGAKQTGETLKINILDHDIPEDPAEEWLGSWVNLLK
9	MUSTER	2hnaA	0.286	0.987	3.398	threading_9	MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGPLLE--DLPASGIWLVISSTHGAGDIPDNLSPFYEALQEQKPDLSAVRFGAIGIGSREYDTFCGAIDKLEAELKNSGAKQTGETLKINILDHDIPEDPAEEWLGSWVNLLK
10	SPARKS	1ja1a	0.224	0.987	3.328	threading_10	GRNIIVFYGSQTGTAEEFANRLSKDAHRYGMRGMSADPEEYDLADLIDKSLVVFCMATYGEGDPTDNAQDFYDWLQETDVDLTGVKFAVFGLGNKTYEHFNAMGKYVDQRLEQLGAQRIFELGLGDDDGN--LEEDFITWREQFWPAVC

Predicted Tertiary Structure


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TM-score=0.956 to 1ykgA SCOP code=c.23.5.2	TM-score=0.365 to 1xheB SCOP code=c.23.1.1	TM-score=0.898 to 1ja0A SCOP code=b.43.4.1	TM-score=0.698 to 1ykgA SCOP code=c.23.5.2	TM-score=0.956 to 1ykgA SCOP code=c.23.5.2