Template-based Modeling Results for ZNTR_ECOLI

Submitted Primary Sequence

>Length 141
MYRIGELAKMAEVTPDTIRYYEKQQMMEHEVRTEGGFRLYTESDLQRLKFIRHARQLGFSLESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQSMQRSLQRLNDACCGTAHSSVYCSILEALEQGASGVKSGC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MYRIGELAKMAEVTPDTIRYYEKQQMMEHEVRTEGGFRLYTESDLQRLKFIRHARQLGFSLESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQSMQRSLQRLNDACCGTAHSSVYCSILEALEQGASGVKSGC
CCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MYRIGELAKMAEVTPDTIRYYEKQQMMEHEVRTEGGFRLYTESDLQRLKFIRHARQLGFSLESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQSMQRSLQRLNDACCGTAHSSVYCSILEALEQGASGVKSGC
513102003203022200110242300323221321110023100200200200250211030012002022324322032021002310320231022022014002301310122231122010021032212224132
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MYRIGELAKMAEVTPDTIRYYEKQQMMEHEVRTEGGFRLYTESDLQRLKFIRHARQLGFSLESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQSMQRSLQRLNDACCGTAHSSVYCSILEALEQGASGVKSGC
1	MUSTER	1q05B	0.370	0.901	3.537	threading_1	-MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVGFNLEESGELVNLFNDPQ--HSADVKRRTLEKVAEIERHIEELQSMRDQLLALANACPGDDSA--DCPIIENLSG---------
2	SPARKS	1q05a	0.385	0.865	3.504	threading_2	-MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVGFNLEESGELVNLFNDPQR-HSADVKRRTLEKVAEIERHIEELQSMRDQLLALANACPG-------CPIIENLS----------
3	PROSPECT2	3gp4A	0.258	0.936	2.548	threading_3	SLNIKEASEKSGVSADTIRYYERIGLIPPIHRNESGVRKFGAEDLRWILFTRQMRRAGLSIEALIDYLALFREGE-HTLEARAELLKKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIP--AQEELKDFNVERS------
4	PPA-I	1q05B	0.378	0.901	4.831	threading_4	-MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVGFNLEESGELVNLFNDPQH--SADVKRRTLEKVAEIERHIEELQSMRDQLLALANACPGDDSA--DCPIIENLSG---------
5	HHPRED-l	1q06_A	0.385	0.865	3.820	threading_5	-MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVGFNLEESGELVNLFNDPQ-RHSADVKRRTLEKVAEIERHIEELQSMRDQLLALANACPG-------CPIIENLS----------
6	HHPRED-g	1q06_A	0.385	0.865	4.058	threading_6	-MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVGFNLEESGELVNLFNDPQR-HSADVKRRTLEKVAEIERHIEELQSMRDQLLALANACPG-------CPIIENLS----------
7	SP3	1q05a	0.385	0.865	3.870	threading_7	-MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVGFNLEESGELVNLFNDPQR-HSADVKRRTLEKVAEIERHIEELQSMRDQLLALANACPG-------CPIIENLS----------
8	SAM-T99	1q05B	0.378	0.901	4.801	threading_8	-MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVGFNLEESGELVNLFNDPQ--HSADVKRRTLEKVAEIERHIEELQSMRDQLLALANACPGD--DSADCPIIENLSG---------
9	MUSTER	3gp4A	0.258	0.936	3.363	threading_9	SLNIKEASEKSGVSADTIRYYERIGLIPPIHRNESGVRKFGAEDLRWILFTRQMRRAGLSIEALIDYLALFREGEH-TLEARAELLKKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIPA--QEELKDFNVERS------
10	SPARKS	2zhga	0.233	0.851	3.407	threading_10	LLTPGEVAKRSGVAVSALHFYESKGLIT-SIRNSGNQRRYKRDVLRYVAIIKIAQRIGIPLATIGEAF-----GVTLSAKEWKQLSSQWREELDRRIHTLVALRDELDGCI-GCGCLSRS--DCPLRNP------------

Predicted Tertiary Structure


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TM-score=0.870 to 1q05B TM-score=0.745 to native SCOP code=a.6.1.3	TM-score=0.456 to 1hzdA TM-score=0.255 to native SCOP code=c.14.1.3	TM-score=0.704 to 1q05B TM-score=0.548 to native SCOP code=a.6.1.3	TM-score=0.589 to 1r8dA TM-score=0.553 to native SCOP code=a.6.1.3	TM-score=0.872 to 1q05B TM-score=0.716 to native SCOP code=a.6.1.3

Experimental Structure

Download 1q08A

SCOP code=a.6.1.3