Template-based Modeling Results for LFTR_ECOLI


  Submitted Primary Sequence

>Length 234
MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLPNNFWVPRCLFSPQE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLPNNFWVPRCLFSPQE
CCCEECCCCCCCCCCHHHHCCCCCCEEEECCCCCHHHHHHHHHCCEECCCCCCCCEEEECCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEEEEEECCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLPNNFWVPRCLFSPQE
341110143212011021014333000000020102100200220000001322000000011100011321300320131144220200011001200200023233111002100200130041110000100223100000000001100001110022320010000000200221201000010113102210002021320120022023132233121232222348
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLPNNFWVPRCLFSPQE
1MUSTER2z3oA1.0000.9914.732threading_1-RLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLPNNFWVPRCLFSPQ-
2SPARKS2cxaa0.9410.9445.083threading_2-RLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARL-LAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSK-RFHKRSPYRVT-NYAFGQVIEGCA---SDGTWITRGVVEAYHRLHELGHAHSIEVWREDELV-GGYGVAQGTLFCGESFSR--ENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQRLGRL-PNNFWVPRCLFSP--
3PROSPECT22cxaA0.9370.9444.882threading_3-RLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLL-AYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSKRF-HKRSPYRV-TNYAFGQVIEGCA---SDGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGG-YGVAQGTLFCGESFSR--ENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQRLGRL-PNNFWVPRCLFSP--
4PPA-I2z3oA1.0000.99114.168threading_4-RLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLPNNFWVPRCLFSPQ-
5HHPRED-l2cxa_A1.0000.94413.199threading_5-RLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLL-AYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRS-KRFHKRSPYRVT-NYAFGQVIEGCASD---GTWITRGVVEAYHRLHELGHAHSIEVWREDELVGG-YGVAQGTLFCGES-FSR-ENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQ-RLGRLPNNFWVPRCLFSP--
6HHPRED-g2cxa_A1.0000.94411.392threading_6-RLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLL-AYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRS-KRFHKRSPYRVT-NYAFGQVIEGCASD---GTWITRGVVEAYHRLHELGHAHSIEVWREDELVGG-YGVAQGTLFCGES-FSR-ENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQ-RLGRLPNNFWVPRCLFSP--
7SP32cxaa0.9320.9442.309threading_7-RLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARL-LAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSK-RFHKRSPYRVT-NYAFGQVIEGCA---SDGTWITRGVVEAYHRLHELGHAHSIEVWREDELV-GGYGVAQGTLFCGESFSR--ENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQRLGRLPNN-FWVPRCLFSP--
8SAM-T992z3oA1.0000.98710.816threading_8-RLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLPNNFWVPRCLFSP--
9MUSTER1zd4A10.1760.8720.596threading_9LRVFDLD---LALPAVFGVLGR----TEEALALPRGLLNDAFQKG-----GPEGA---TTRLMKGEITLSQWIMEENCRKCSETAKVCLPKNFSIKEIFDKAISARK----INRPMLQAALMLRKKGFTTAILTWLDDGLAQLMCELKFDFLIESCQVGMVKPE--PQIYKFLLDTLSPSEVVFLDDIGANKPARDLGMVTIDTDTALKELEKVTGIQL---------LNTPAP
10SPARKS7odca20.1490.7480.625threading_10------DLGDIALPRVSTLAAIGTGFDCA----SKTEIQLVQGLGV-------------PAER--VIYANPCKQVSQIKYAASNGVQMMTFDS--EIELMKVARAHPKALRIAKTSRLLLERAKELNI--------------DVIGVS---FHVG----SGCTDQAVSDARCVFDMATEVGFSLLD----------IGGTKLKFEEITSVINPALDKYFPSDS-GVRIIAEPGR

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.563 to 2ozgA
TM-score=0.998 to native
SCOP code=d.106.1.4
TM-score=0.563 to 2ozgA
TM-score=0.998 to native
SCOP code=d.106.1.4
TM-score=0.567 to 1xf8A
TM-score=0.968 to native
SCOP code=d.108.1.4
TM-score=0.566 to 1xf8A
TM-score=0.970 to native
SCOP code=d.108.1.4
TM-score=0.563 to 2ozgA
TM-score=0.998 to native
SCOP code=d.106.1.4

  Experimental Structure

Download 2dptA
SCOP code=d.106.1.4