Template-based Modeling Results for ABGB_ECOLI


  Submitted Primary Sequence

>Length 481
MQEIYRFIDDAIEADRQRYTDIADQIWDHPETRFEEFWSAEHLASALESAGFTVTRNVGNIPNAFIASFGQGKPVIALLGEYDALAGLSQQAGCAQPTSVTPGENGHGCGHNLLGTAAFAAAIAVKKWLEQYGQGGTVRFYGCPGEEGGSGKTFMVREGVFDDVDAALTWHPEAFAGMFNTRTLANIQASWRFKGIAAHAANSPHLGRSALDAVTLMTTGTNFLNEHIIEKARVHYAITNSGGISPNVVQAQAEVLYLIRAPEMTDVQHIYDRVAKIAEGAALMTETTVECRFDKACSSYLPNRTLENAMYQALSHFGTPEWNSEELAFAKQIQATLTSNDRQNSLNNIAATGGENGKVFALRHRETVLANEVAPYAATDNVLAASTDVGDVSWKLPVAQCFSPCFAVGTPLHTWQLVSQGRTSIAHKGMLLAAKTMAATTVNLFLDSGLLQECQQEHQQVTDTQPYHCPIPKNVTPSPLK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQEIYRFIDDAIEADRQRYTDIADQIWDHPETRFEEFWSAEHLASALESAGFTVTRNVGNIPNAFIASFGQGKPVIALLGEYDALAGLSQQAGCAQPTSVTPGENGHGCGHNLLGTAAFAAAIAVKKWLEQYGQGGTVRFYGCPGEEGGSGKTFMVREGVFDDVDAALTWHPEAFAGMFNTRTLANIQASWRFKGIAAHAANSPHLGRSALDAVTLMTTGTNFLNEHIIEKARVHYAITNSGGISPNVVQAQAEVLYLIRAPEMTDVQHIYDRVAKIAEGAALMTETTVECRFDKACSSYLPNRTLENAMYQALSHFGTPEWNSEELAFAKQIQATLTSNDRQNSLNNIAATGGENGKVFALRHRETVLANEVAPYAATDNVLAASTDVGDVSWKLPVAQCFSPCFAVGTPLHTWQLVSQGRTSIAHKGMLLAAKTMAATTVNLFLDSGLLQECQQEHQQVTDTQPYHCPIPKNVTPSPLK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCCCEECCCCCEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MQEIYRFIDDAIEADRQRYTDIADQIWDHPETRFEEFWSAEHLASALESAGFTVTRNVGNIPNAFIASFGQGKPVIALLGEYDALAGLSQQAGCAQPTSVTPGENGHGCGHNLLGTAAFAAAIAVKKWLEQYGQGGTVRFYGCPGEEGGSGKTFMVREGVFDDVDAALTWHPEAFAGMFNTRTLANIQASWRFKGIAAHAANSPHLGRSALDAVTLMTTGTNFLNEHIIEKARVHYAITNSGGISPNVVQAQAEVLYLIRAPEMTDVQHIYDRVAKIAEGAALMTETTVECRFDKACSSYLPNRTLENAMYQALSHFGTPEWNSEELAFAKQIQATLTSNDRQNSLNNIAATGGENGKVFALRHRETVLANEVAPYAATDNVLAASTDVGDVSWKLPVAQCFSPCFAVGTPLHTWQLVSQGRTSIAHKGMLLAAKTMAATTVNLFLDSGLLQECQQEHQQVTDTQPYHCPIPKNVTPSPLK
4540132023003302420020022015001121321100210020033120202110140100000211424200000011100010122122232222221320000000000000000010023012322230100000010222230111003200033000000001202101010210000000010201000002012202000000000010020014112341100000011112121101120101000102222003201210130020003114020102012202111113201200020023102132223001002201320123323211111112113313111121231111330011111111211112101000100000000000121011102200210302201300010010000000200122200330132024224322120101432222324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMQEIYRFIDDAIEADRQRYTDIADQIWDHPETRFEEFWSAEHLASALESAGFTVTRNVGNIPNAFIASFGQGKPVIALLGEYDALAGLSQQAGCAQPTSVTPGENGHGCGHNLLGTAAFAAAIAVKKWLEQYGQGGTVRFYGCPGEEGGSGKTFMVREGVFDDVDAALTWHPEAFAGMFNTRTLANIQASWRFKGIAAHAANSPHLGRSALDAVTLMTTGTNFLNEHIIEKARVHYAITNSGGISPNVVQAQAEVLYLIRAPEMTDVQHIYDRVAKIAEGAALMTETTVECRFDKACSSYLPNRTLENAMYQALSHFGTPEWNSEELAFAKQIQATLTSNDRQNSLNNIAATGGENGKVFALRHRETVLANEVAPYAATDNVLAASTDVGDVSWKLPVAQCFSPCFAVGTPLHTWQLVSQGRTSIAHKGMLLAAKTMAATTVNLFLDSGLLQECQQEHQQVTDTQPYHCPIPKNVTPSPLK
1MUSTER3ramA0.2880.7882.650threading_1--GEKQQILDYIETNKYSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDLDGPAIGFLAEYDALPGL-----------------GHACGHNIIGTASVLGAIGLKQVIDQ--IGGKVVVLGCPAEEGGSAKASYVKAGVIDQID-IALIHPG-NETYKTIDTLAVDVLDVKFYGKSAHASENADEALNALDA-ISYFNGVAQLRQHIKKDQRVHGVIL-DGGKAANIIPDYTHARFYTRAT-RKELDILTEKVNQIARGAAIQTGCDYEFGPQNGVNEFIKTPKLDDLFAKYAEEVGEAVIDDD--------------------------------------------------------FGYGSTDTGNVSHVVPTIHPHIKIGSRNLVGHTHRFREAAASVHGDEALIKGAKIA--LGLELITNQDVYQDIIEEHAHLKG------------------
2SPARKS3rama0.2570.7846.218threading_2--GEKQQILDYIETNKYSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGTGFIATYDSGLDGPAIGFLAEYDALP-----------------GLGHACGHNIIGTASVLGAIGLKQVID--QIGGKVVVLGCPAEEGGSAKASYVKAGVIDQIDIAL-IHPG-NETYKTIDTLAVDVLDVKFYGKSAHASENADEALN----ALDAISYFNGVAQLHIKKDQRVHGVILDGGKAANIIPDYTHARFYTRAT-RKELDILTEKVNQIARGAAIQTGCDYEFGIQNGVNEFIKTPKLDDLFAKYAEEVGEAVIDDD--------------------------------------------------------FGYGSTDTGNVSHVVPTIHPHIKIGSRNLVGHTHRFREAAASVHGDEALIKGAKIA--LGLELITNQDVYQDIIEEHAHLKG------------------
3PROSPECT23ramA0.2960.7884.358threading_3--GEKQQILDYIETNKYSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYGLDGPAIGFLAEYDALPG-----------------LGHACGHNIIGTASVLGAIGLKQVIDQ--IGGKVVVLGCPAEEGGSAKASYVKAGVIDQIDIAL-IHPG-NETYKTIDTLAVDVLDVKFYGKSAHASENADEALNALDAI-SYFNGVAQLRQHIKKDQRVHGVILD-GGKAANIIPDYTHARFYTRAT-RKELDILTEKVNQIARGAAIQTGCDYEFGPQNGVNEFIKTPKLDDLFAKYAEEVGEAVID--------------------------------------------------------DDFGYGSTDTGNVSHVVPTIHPHIKIGSRNLVGHTHRFREAAASVHGDEALIKGAKIA--LGLELITNQDVYQDIIEEHAHLKG------------------
4PPA-I3ramA0.2900.7884.533threading_4--GEKQQILDYIETNKYSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSDGPAIGFLAEYDALPGL-----------------GHACGHNIIGTASVLGAIGLKQVIDQ--IGGKVVVLGCPAEEGGSAKASYVKAGVIDQID-IALIHPG-NETYKTIDTLAVDVLDVKFYGKSAHASENADEALNALDA-ISYFNGVAQLRQHIKKDQRVHGVILD-GGKAANIIPDYTHARFYTRAT-RKELDILTEKVNQIARGAAIQTGCDYEFGPQNGVNEFIKTPKLDDLFAKYAEEVGEAVI--------------------------------------------------------DDDFGYGSTDTGNVSHVVPTIHPHIKIGSRNLVGHTHRFREAAASVHGDEALIKGAKIA--LGLELITNQDVYQDIIEEHAHLKG------------------
5HHPRED-l1xmb_A0.1770.7404.486threading_5------KLLEFAKEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVA--ITGVIGYIGTGPPFVALRADMDALPI-QEGVEWEHKSK--IAGKMHACGHDGHVTMLLGAAKILHEH--RHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGGSFLAGAGVFEAVITGK----------TIDPVVAASSIVLSLQQLVSTDPLDSKVVTVSKVN--------PDSITIGGTLRAFTGFT--QLQQRVKEVITKQAAVHRCNASVNLTEPMPPTVNNKDLYKQFKKVVRDLGQEA------------------------------------------------------F-VEAAPVMGSEDFSYFAETIPGHFSLLGMQDETASSHSPLY------RINEDVLPYGAAIHASMAVQYLKEKAS-------------------------------
6HHPRED-g1xmb_A0.1780.7464.704threading_6------KLLEFAKEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAI--TGVIGYIGTGEPFVALRADMDALPI--QEGVEWEHKSKIAGKM-HACGHDGHVTMLLGAAKILHEH--RHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHARIPFGKAASRAGSAGVFEAVITGK----------TIDPVVAASSIVLSLQQLVSRETDPSKVVTVSKVN--------PDSITIGGTLRAFTGF--TQLQQRVKEVITKQAAVHRCNASVNLTEPMPPTVNNKDLYKQFKKVVRDLGQEAFVEA-APVMGSEDFSYFAETIPGHFSLLGMQDETNG-YASSHSPLYRINED--------------------------------------------------------VLPYGAAIHASMAVQYLKEKAS-------------------------------
7SP33rama0.2570.7846.784threading_7--GEKQQILDYIETNKYSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGTGFIATYDSGLDGPAIGFLAEYDALP-----------------GLGHACGHNIIGTASVLGAIGLKQVI--DQIGGKVVVLGCPAEEGGSAKASYVKAGVIDQID-IALIHPG-NETYKTIDTLAVDVLDVKFYGKSAHASENADEALNAL----DAISYFNGVAQLRIKKDQRVHGVILDGGKAANIIPDYTHARFYTRAT-RKELDILTEKVNQIARGAAIQTGCDYEFGIQNGVNEFIKTPKLDDLFAKYAEEVGEAVI------------------------------------------------DDDFGYGS--------TDTGNVSHVVPTIHPHIKIGSRNLVGHTHRFREAAASVHGDEALIKGAKIA--LGLELITNQDVYQDIIEEHAHLKG------------------
8SAM-T993ramA0.2920.7846.761threading_8----KQQILDYIETNKYSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGGPAIGFLAEYDALP-----------------GLGHACGHNIIGTASVLGAIGLKQVIDQ--IGGKVVVLGCPAEEGGSAKASYVKAGVIDQIDIAL-IHPGNETYK-TIDTLAVDVLDVKFYGKSAHASENADEALNALDA-ISYFNGVAQLRQHIKKDQRVHGVIL-DGGKAANIIPDYTHARFYTRA-TRKELDILTEKVNQIARGAAIQTGCDYEFGIQNGVNEFIKTPKLDDLFAKYAEEVGEAVIDDD--------------------------------------------------------FGYGSTDTGNVSHVVPTIHPHIKIGSRNLVGHTHRFREAAASVHGDEALIKGAKIA--LGLELITNQDVYQDIIEEHAHLKG------------------
9MUSTER2q43A0.1850.7401.983threading_9--KLLEFAKS--PEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEP-PFVALRADMDALPI--QEGVEWEHKSKIAG-KMHACGHDGHVTMLLGAAKILHEHRH--HLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHARIPFGKAASRAGSFLAGAGVFEAV---------KTIDPVVAASSIVLSLQQLVSRETDPSKVVTVSK--------VNPDSITIGGTLRAFTG--FTQLQQRVKEVITKQAAVHRCNASVNLTEPMPPTVNNKDLYKQFKKVVRDLLGPVMGSEDFSYFAE--------TIPGHFSLLGMQDETNG-YASSHSPLYRINED--------------------------------------------------------VLPYGAAIHASMAVQYLKEKAS-------------------------------
10SPARKS1xmba0.1820.7425.296threading_10------KLLEFAPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGE-PPFVALRADMDALPI--QEGVEWEHKSKIAGK-MHACGHDGHVTMLLGAAKILHEHRHH--LQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHARIPFGKAASRAGSFLAGAGVFEAVI------TGKTIDPVVAASSIVLSLQQLVSRETDPSKVVTVSKV--------NPDSITIGGTLRAFTG--FTQLQQRVKEVITKQAAVHRCNASVNLREPMPPTVNNKDLYKQFKKVVRDLLGPVMGSEDFSYFAE--------TIPGHFSLLGMQD-ETNGYASSHSPLYRINEDVLPYGAAIHASMAVQYLKEKAS---------------------------------------------------------------------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.645 to 2q43A
SCOP code=c.56.5.4
TM-score=0.640 to 2q43A
SCOP code=c.56.5.4
TM-score=0.641 to 2q43A
SCOP code=c.56.5.4
TM-score=0.660 to 2q43A
SCOP code=c.56.5.4
TM-score=0.660 to 1cg2A
SCOP code=c.56.5.4