Template-based Modeling Results for ALSK_ECOLI


  Submitted Primary Sequence

>Length 309
MQKQHNVVAGVDMGATHIRFCLRTAEGETLHCEKKRTAEVIAPGLVSGIGEMIDEQLRRFNARCHGLVMGFPALVSKDKRTIISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTGMGFAVWMNGAPWTGAHGVAGELGHIPLGDMTQHCACGNPGCLETNCSGMALRRWYEQQPRNYPLRDLFVHAENAPFVQSLLENAARAIATSINLFDPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQRFLPQFCAKAP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQKQHNVVAGVDMGATHIRFCLRTAEGETLHCEKKRTAEVIAPGLVSGIGEMIDEQLRRFNARCHGLVMGFPALVSKDKRTIISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTGMGFAVWMNGAPWTGAHGVAGELGHIPLGDMTQHCACGNPGCLETNCSGMALRRWYEQQPRNYPLRDLFVHAENAPFVQSLLENAARAIATSINLFDPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQRFLPQFCAKAP
CCCCCCEEEEEEECCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEECHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEECCEEEECCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MQKQHNVVAGVDMGATHIRFCLRTAEGETLHCEKKRTAEVIAPGLVSGIGEMIDEQLRRFNARCHGLVMGFPALVSKDKRTIISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTGMGFAVWMNGAPWTGAHGVAGELGHIPLGDMTQHCACGNPGCLETNCSGMALRRWYEQQPRNYPLRDLFVHAENAPFVQSLLENAARAIATSINLFDPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQRFLPQFCAKAP
554432000000001020200011231200111212124221300020002002201431422010000000111133310000011011210321300210141030100011000000001003222222000000000000000001000010010000100000012113202001200000001020012102322531203100221341300210021002000000100001000000000201200130012002310232122320200102022100000000000230022112314
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMQKQHNVVAGVDMGATHIRFCLRTAEGETLHCEKKRTAEVIAPGLVSGIGEMIDEQLRRFNARCHGLVMGFPALVSKDKRTIISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTGMGFAVWMNGAPWTGAHGVAGELGHIPLGDMTQHCACGNPGCLETNCSGMALRRWYEQQPRNYPLRDLFVHAENAPFVQSLLENAARAIATSINLFDPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQRFLPQFCAKAP
1MUSTER2aa4A0.1980.9162.975threading_1M-----TTLAIDIGGTKLAAALIGADGQIRDRRELPTPSQTPEALRDALSALVSPLQAHAQ----RVAIASTGIIRDGSLLALNPHNLG--GLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALDGDITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADPHGPVCGCGRTGCVEAIASGRGIAAAAQGELAGADAKTIFTRAGQGQLIHRSARTLARLIADIKATTDCQCVVVGGSVGLAEG-YLALVETYLAQE----PAAFHVDLLAAHYRHDAGLLGAALLAQGE----------
2SPARKS3vgka0.2720.9295.372threading_2------LTIGVDIGGTKIAAGVVDEEGRILSTFKVATPPTA-EGIVDAICAAVAGASE--GHDVEAVGIGAAGYVDDKRATVLFAPNIDWR---HEPLKDKVEQRVGLPVVVENDANAAAWGEYRGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDGLLCGCGSQGCWEQYASGRALVRYAKQRADGIEGKHISEAARQGDSFRELARWAGAGLADLASLFDPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLARQG----------
3PROSPECT22qm1A0.2530.9614.735threading_3-SNADKKIIGIDLGGTTIKFAILTTDGVVQQKWSIETNLEDGKHIVPSIIESIRHRIDLYNKEDFVGIGGTPGSVDIEKGTVVGAYNLNW--TTVQPVKEQIESALGIPFALDNDANVAALGERWGAGENNPDVIFITLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVDPNGFDCTCGKRGCLETVSSATGVVRVARHLSEDVSSKDVFEFAEKGDVVDRVCFYLGLATGNLGNTLNPDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQV-RNSTKIKLAELGNEAGVIGAASLALQF--------SK
4PPA-I2aa4A0.1940.9194.548threading_4-----MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQT---PEALRDALSALVSPLQAHAQRVAIASTGIIRDGSLLALNPHNLG--GLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALDGDITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADPHGPVCGCGRTGCVEAIASGRGIAAAAQGELAGADAKTIFTRAGQGQLIHRSARTLARLIADIKATTDCQCVVVGGSVGLAEG-YLALVETYLAQE----PAAFHVDLLAAHYRHDAGLLGAALLAQGE----------
5HHPRED-l1z05_A0.2050.9813.596threading_5TNNLGWQFLSMRLGRGYLTIALHELGGEVLIDTKIDIHEIDQDDVLARLLFEIEEFFQTYAARVTSIAITLPGLVNSEQGIVLQMPHY---NVKNLALGPEIYKATGLPVFVANDTRAWALEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQIDPQGKRCHCGNYGCLETVASSQAIRDQVTARIEDICAAAADGDPLAVDVIQQLGRYLGAAIAIVINLFNPEKILIGGVINQAKSILYPSIEQCIREQSLPV-YHQDLKLVESRFYKQATMPGAALIK-QALYDGLLMKV-
6HHPRED-g3htv_A0.9740.8613.135threading_6--KQHNVVAGVD-GATHIRFCLRTAEGETLHCEKKRTAEVIAPGLVSGIGE-IDEQLRRFNARCHGLV-GFPALVSKDKRTIISTPNLP--LTDLYDLADKLENTLNCPVEFSRDVNLQLSWDVVNRLTQ-QLVLAAYLGTG-GFAVW-NGAPWTGAHGVAGE---------------------ETNCSG-ALRRWYEQQPRNYPLRDLFVHAENAPFVQSLLENAARAIATSINLFDPDAVILGGGV---PAFPRETLVA-TQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQRFLP-------
7SP33vgka0.2720.9295.026threading_7------LTIGVDIGGTKIAAGVVDEEGRILSTFKVATPPTA-EGIVDAICAAVAGASE--GHDVEAVGIGAAGYVDDKRATVLFAPNIDWR---HEPLKDKVEQRVGLPVVVENDANAAAWGEYRGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDGLLCGCGSQGCWEQYASGRALVRYAKQRADGIEGKHISEAARQGDSFRELARWAGAGLADLASLFDPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLARQG----------
8SAM-T993vgkA0.2810.9224.229threading_8------LTIGVDIGGTKIAAGVVDEEGRILSTFKVATP-PTAEGIVDAICAAVAGASEGHD--VEAVGIGAAGYVDDKRATVLFAPNI---DWRHEPLKDKVEQRVGLPVVVENDANAAAWGEYRFGGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDGLLCGCGSQGCWEQYASGRALVRYAKQRD-GIEGKHISEAAQGDPSFRELARWAGAGLADLASLFDPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLARQ-----------
9MUSTER2ap1A0.2330.9322.961threading_9----NAMYYGFDIGGTKIALGVFDSTRRLQWEKRVPTPHTSYSAFLDAVCELVEEADQRFGVK-GSVGIGIPGMPETEDGTLYAANV---PAASGKPLRADLSARLDRDVRLDNDANCFALSEAWDEFTQYPLVMGLILGTGVGGGLVLNGKPITGQSYITGEFGHMRLPVDARRCGCGQMGCIENYLSGRGFAWLYQHYYDSLQAPEIIALWEQGAHVERYLDLLAVCLGNILTIVDPDLLVIGGGLSNF-TAITTQLAERLPRHLLPV--ARAPRIERARHGDAGGMRGAAFLHLTD----------
10SPARKS1z05a0.2070.9874.715threading_10TNNLGWQFLSMRLGRGYLTIALHELGGEVLIDTKIDIHEIDQDDVLARLLFEIEEFFQTYAAQVTSIAITLPGLVNSEQGIVLQMPHYNVK---NLALGPEIYKATGLPVFVANDTRAWALAEKLGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQIDPQGKRCHCGNYGCLETVASSQAIRDQVTARIQEISIEDICAAAADGDVIQQLGRYLGAAIAIVINLFNPEKILIGGVINQAKSILYPSIEQCIREQSL-PVYHQDLKLVESRFYKQATMPGAALIKQALYDGLLLMKVV

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.939 to 2aa4A
TM-score=0.805 to native
SCOP code=c.55.1.10
TM-score=0.844 to 2aa4A
TM-score=0.823 to native
SCOP code=c.55.1.10
TM-score=0.859 to 2aa4A
TM-score=0.807 to native
SCOP code=c.55.1.10
TM-score=0.840 to 2ap1A
TM-score=0.834 to native
SCOP code=c.55.1.10
TM-score=0.945 to 2aa4A
TM-score=0.804 to native
SCOP code=c.55.1.10

  Experimental Structure

Download 3htvA
SCOP code=c.55.1.10