Template-based Modeling Results for AMIC_ECOLI

Submitted Primary Sequence

>Length 417
MSGSNTAISRRRLLQGAGAMWLLSVSQVSLAAVSQVVAVRVWPASSYTRVTVESNRQLKYKQFALSNPERVVVDIEDVNLNSVLKGMAAQIRADDPFIKSARVGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPANAQDMQDPLLALLEDYNKGDLEKQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGKYKTREKDVVLQIARRLRSLIEKEGNMKVYMTRNEDIFIPLQVRVAKAQKQRADLFVSIHADAFTSRQPSGSSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLKFGKAVLNKLGKINKLHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTATFQQEVAESILAGIKAYFADGATLARRG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSGSNTAISRRRLLQGAGAMWLLSVSQVSLAAVSQVVAVRVWPASSYTRVTVESNRQLKYKQFALSNPERVVVDIEDVNLNSVLKGMAAQIRADDPFIKSARVGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPANAQDMQDPLLALLEDYNKGDLEKQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGKYKTREKDVVLQIARRLRSLIEKEGNMKVYMTRNEDIFIPLQVRVAKAQKQRADLFVSIHADAFTSRQPSGSSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLKFGKAVLNKLGKINKLHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTATFQQEVAESILAGIKAYFADGATLARRG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEECCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSGSNTAISRRRLLQGAGAMWLLSVSQVSLAAVSQVVAVRVWPASSYTRVTVESNRQLKYKQFALSNPERVVVDIEDVNLNSVLKGMAAQIRADDPFIKSARVGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPANAQDMQDPLLALLEDYNKGDLEKQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGKYKTREKDVVLQIARRLRSLIEKEGNMKVYMTRNEDIFIPLQVRVAKAQKQRADLFVSIHADAFTSRQPSGSSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLKFGKAVLNKLGKINKLHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTATFQQEVAESILAGIKAYFADGATLARRG
553332122202001000000000000010022120100101233210000010333141210113222100000230312221321223142333102101012323320100020333131100102322224210002122232332333222223322323233312223222322422433200000000010312101032312101000200220120025222020000133222020310011034241100000001012243120010001124222220021003122223212222422232012001111212111101200310022004114234231331100002214000000100101123113303222002200200020011002311221444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSGSNTAISRRRLLQGAGAMWLLSVSQVSLAAVSQVVAVRVWPASSYTRVTVESNRQLKYKQFALSNPERVVVDIEDVNLNSVLKGMAAQIRADDPFIKSARVGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPANAQDMQDPLLALLEDYNKGDLEKQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGKYKTREKDVVLQIARRLRSLIEKEGNMKVYMTRNEDIFIPLQVRVAKAQKQRADLFVSIHADAFTSRQPSGSSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLKFGKAVLNKLGKINKLHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTATFQQEVAESILAGIKAYFADGATLARRG
1	MUSTER	3ne8A	0.395	0.528	1.925	threading_1	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASFRVVLDPGHGGIDGGARGVTGILEKDVTLAFARALRDELQKGSHTIVALTRDSDIFLRLSERVKKAQEFDADLFISIHADTIDVHSLRGATVYTISDE-ASDAIAKSLAESENKVDLLDGLPKED------ILLDLTRRETHAFSINFANNVVSNLSKSINLINNPHRYADFQVLKAPDVPSVLIEIGYLSNKEDEKLLNN-PQWRKQAASIAYSIRQFAEYRQPL----
2	SPARKS	3ne8a	0.391	0.528	4.775	threading_2	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASFRVVLDPGHGGIDGGARGVTGILEKDVTLAFARALRDELQKGSHTIVALTRDSDIFLRLSERVKKAQEFDADLFISIHADTIDVHSLRGATVYTISDE-ASDAIAKSLAESENKVDLLDGLPKED------ILLDLTRRETHAFSINFANNVVSNLSKSHNLINNPHRYADFQVLKAPDVPSVLIEIGYLSNKEDEKLLNNPQWRKQA-ASIAYSIRQFAEYIQPL----
3	PROSPECT2	3ne8A	0.386	0.535	3.417	threading_3	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASFRVVLDPGHGGIDGGARGVTGILEKDVTLAFARALRDELQKGSHTIVALTRDSDIFLRLSERVKKAQEFDADLFISIHADTIDVHSLRGATVYTISDE-ASDAIAKSLAESENKVDLLDGLPKED------ILLDLTRRETHAFSINFANNVVSNLSKSINLINNPHRYADFQVLKAPDVPSVLIEIGYLSNKEDEKLLNNPQWRKQAA-SIAYSIRQFAEYRQK-IQPL
4	PPA-I	3ne8A	0.380	0.530	3.078	threading_4	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASFRVVLDPGHGGIDGGARGVTGILEKDVTLAFARALRDELQKGSHTIVALTRDSDIFLRLSERVKKAQEFDADLFISIHADTIDVHSLRGATVYTISDE-ASDAIAKSLAESENKVDLLDGLPKED------ILLDLTRRETHAFSINFANNVVSNLSKSHNLINNPHRYADFQVLKAPDVPSVLIEIGYLSNKEDEKLLNNPQWRKQAASIAYSIRQFAEYRQQPL----
5	HHPRED-l	3ne8_A	0.378	0.532	6.719	threading_5	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASFRVVLDPGHGGIDGGARGVTGILEKDVTLAFARALRDELQKGSHTIVALTRDSDIFLRLSERVKKAQEFDADLFISIHADTIDVHSLRGATVYTISDEA-SDAIAKSLAESENKVDLLDGLPKE------DILLDLTRRETHAFSINFANNVVSNLKSHINLINNPHRYADFQVLKAPDVPSVLIEIGYLSNKEDEKLLNNPQWRKQ-AASIAYSIRQFAEYRQKI-QP-
6	HHPRED-g	3ne8_A	0.377	0.535	6.242	threading_6	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASFRVVLDPGHGGIDGGARGVTGILEKDVTLAFARALRDELQKGSHTIVALTRDSDIFLRLSERVKKAQEFDADLFISIHADTIDVHSLRGATVYTISDEASD-AIAKSLAESENKVDLLDGLPKE------DILLDLTRRETHAFSINFANNVVSNLKSHINLINNPHRYADFQVLKAPDVPSVLIEIGYLSNKEDEKLLNNPQWRKQ-AASIAYSIRQFAEYRQKI-QPL
7	SP3	3ne8a	0.391	0.528	5.145	threading_7	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASFRVVLDPGHGGIDGGARGVTGILEKDVTLAFARALRDELQKGSHTIVALTRDSDIFLRLSERVKKAQEFDADLFISIHADTIDVHSLRGATVYTISDE-ASDAIAKSLAESENKVDLLDGLPKED------ILLDLTRRETHAFSINFANNVVSNLSKSHNLINNPHRYADFQVLKAPDVPSVLIEIGYLSNKEDEKLLNNPQWRKQA-ASIAYSIRQFAEYIQPL----
8	SAM-T99	3ne8A	0.394	0.511	8.020	threading_8	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASFRVVLDPGHGGIDGGARGVTGILEKDVTLAFARALRDELQKGSHTIVALTRDSDIFLRLSERVKKAQEFDADLFISIHADTIDVHSLRGATVYTISDE-ASDAIAKSLAESENKVDLLDG------LPKEDILLDLTRRETHAFSINFANNVVSNLKSHINLINNPHRYADFQVLKAPDVPSVLIEIGYLSNKEDEKLLNNPQWRKQ-AASIAYSIRQF-----------
9	MUSTER	1jwqA	0.315	0.427	1.473	threading_9	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKVVVIDAGHGAKDSGAVGISKNYEKTFNLAMALKVESILKQNPKLEVVLTRSDDTFLELKQRVKVAENLKANVFVSIHANSSGSSASNGTETYYQRSA----------------------------------------------SKAFANVMHKYFAPATGLTDRGIRYGNFHVIRETTMPAVLLEVGYLSNAKEEATLFDEDFQNRVAQGIADGITEYLDVK-------
10	SPARKS	1jwqa	0.309	0.427	3.035	threading_10	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKVVVIDAGHGAKDSGAVGISRNYEKTFNLAMALKVESILKQNPKLEVVLTRSDDTFLELKQRVKVAENLKANVFVSIHANSSGSSASNGTETYYQR----------------------------------------------SASKAFANVMHKYFAPATGLTDRGIRYGNFHVIRETTMPAVLLEVGYLSNAKEEATLFDEDFQNRVAQGIADGITEYLDVK-------

Predicted Tertiary Structure


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TM-score=0.651 to 1jwqA SCOP code=c.56.5.6	TM-score=0.651 to 1jwqA SCOP code=c.56.5.6	TM-score=0.654 to 1jwqA SCOP code=c.56.5.6	TM-score=0.653 to 1jwqA SCOP code=c.56.5.6	TM-score=0.650 to 1jwqA SCOP code=c.56.5.6