Template-based Modeling Results for APPB_ECOLI


  Submitted Primary Sequence

>Length 378
MFDYETLRFIWWLLIGVILVVFMISDGFDMGIGCLLPLVARNDDERRIVINSVGAHWEGNQVWLILAGGALFAAWPRVYAAAFSGFYVAMILVLCSLFFRPLAFDYRGKIADARWRKMWDAGLVIGSLVPPVVFGIAFGNLLLGVPFAFTPQLRVEYLGSFWQLLTPFPLLCGLLSLGMVILQGGVWLQLKTVGVIHLRSQLATKRAALLVMLCFLLAGYWLWVGIDGFVLLAQDANGPSNPLMKLVAVLPGAWMNNFVESPVLWIFPLLGFFCPLLTVMAIYRGRPGWGFLMASLMQFGVIFTAGITLFPFVMPSSVSPISSLTLWDSTSSQLTLSIMLVIVLIFLPIVLLYTLWSYYKMWGRMTTETLRRNENELY
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFDYETLRFIWWLLIGVILVVFMISDGFDMGIGCLLPLVARNDDERRIVINSVGAHWEGNQVWLILAGGALFAAWPRVYAAAFSGFYVAMILVLCSLFFRPLAFDYRGKIADARWRKMWDAGLVIGSLVPPVVFGIAFGNLLLGVPFAFTPQLRVEYLGSFWQLLTPFPLLCGLLSLGMVILQGGVWLQLKTVGVIHLRSQLATKRAALLVMLCFLLAGYWLWVGIDGFVLLAQDANGPSNPLMKLVAVLPGAWMNNFVESPVLWIFPLLGFFCPLLTVMAIYRGRPGWGFLMASLMQFGVIFTAGITLFPFVMPSSVSPISSLTLWDSTSSQLTLSIMLVIVLIFLPIVLLYTLWSYYKMWGRMTTETLRRNENELY
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCHHHHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MFDYETLRFIWWLLIGVILVVFMISDGFDMGIGCLLPLVARNDDERRIVINSVGAHWEGNQVWLILAGGALFAAWPRVYAAAFSGFYVAMILVLCSLFFRPLAFDYRGKIADARWRKMWDAGLVIGSLVPPVVFGIAFGNLLLGVPFAFTPQLRVEYLGSFWQLLTPFPLLCGLLSLGMVILQGGVWLQLKTVGVIHLRSQLATKRAALLVMLCFLLAGYWLWVGIDGFVLLAQDANGPSNPLMKLVAVLPGAWMNNFVESPVLWIFPLLGFFCPLLTVMAIYRGRPGWGFLMASLMQFGVIFTAGITLFPFVMPSSVSPISSLTLWDSTSSQLTLSIMLVIVLIFLPIVLLYTLWSYYKMWGRMTTETLRRNENELY
452232132000000000000000020000000000100133331130001000020301000000000000000020001000000000000000001111001121212323123000000000000000000000000011020211231201110101200000000000000000000000100020222002201300320000000000000000111120000001123121110011000010100100230101100000000000000001232420100000000000000000010011000111012000001102123210000000000000000001000001011202231034233323
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMFDYETLRFIWWLLIGVILVVFMISDGFDMGIGCLLPLVARNDDERRIVINSVGAHWEGNQVWLILAGGALFAAWPRVYAAAFSGFYVAMILVLCSLFFRPLAFDYRGKIADARWRKMWDAGLVIGSLVPPVVFGIAFGNLLLGVPFAFTPQLRVEYLGSFWQLLTPFPLLCGLLSLGMVILQGGVWLQLKTVGVIHLRSQLATKRAALLVMLCFLLAGYWLWVGIDGFVLLAQDANGPSNPLMKLVAVLPGAWMNNFVESPVLWIFPLLGFFCPLLTVMAIYRGRPGWGFLMASLMQFGVIFTAGITLFPFVMPSSVSPISSLTLWDSTSSQLTLSIMLVIVLIFLPIVLLYTLWSYYKMWGRMTTETLRRNENELY
1PROSPECT23a6pA10.1140.9551.693threading_1AMDQALCEQLVKAVTVMVPCGLRLAEKTQFGLQILEHVVKFSRLEKVYLKNSVTLNILEEENHIKDALSRIVVEWPDMLIELDTLSKQETQTELVMFILLRLAEDVVTFQTLPRRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLAGLLEILCLLLNELIAVSRKGKLEDRKPLMVLFGDVAMHYILLKRLCQVLCALGNQLCALLGADSDVETPSNFGKYLE---SFLAFTTHPSQFLRSSTQMTWGALFRHEILSRDPLLLAIIPKYLRASMTNL-----VKMGFPSKTDSPSCEYSRFDFDSDEDFNAFFNSSRAQQGEVMRLAC---------RLDPKTSFKYQLSTF
2PPA-I3g61A40.0800.7961.072threading_2---GWKLTLVILAISPVLGLSAGIW------AKILSSFTDKELHAYAKAGAVAEEVLAA------IRTVIAFGGQKKELERYNNNLEEAKRLGIKKAITA----------------NISMGAAFLLIYASYALAFWYGTSLVISKEYSLDEDVPPASFWRILKLNSFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSR-----LAVIFQNIANLGTGIIISLIYFE--------------------------NVLLVFSAIVFGAM---------------AVGQVSSFAPDY
3PROSPECT21jdha0.0770.9631.652threading_3SKKEASRHAIMRSPQMVSAIVRTMQNTNDVCTAGTLHNLSHHREGLLAIFKSVKMLGSPVDFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALVNIMRTYTYEKLLWTSVCSSNKPAIVEAGGMQALGLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHVGLIRNLALCPANHAPLRRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEA--------------AEAIEAEGARMS
4PPA-I3pblA10.1070.6691.000threading_4--------------------------------------------------------------------------YALSYCALILAIVFGNGLVCMAVLKE-------RALQT------TTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTTGDPTVCSISNP---------DFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKVPLREKKATQMVAIVLGAFIVCWLPFLNTHCQTCHVSPELY------SATTWLGYVNSALNPVIYTTSC-----------------------
5PROSPECT21ee4a0.1330.8971.584threading_5QLNSDDMQEQLSATVKFRPIDVVIQAG---VVPRLVEFMRENEMLQLEAAWALTNIASGTSEQAIWALGNVAGDSTDYRDYVLQCNAMEPILSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLITLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLVAEDKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIAD--NRIIEVTLDALENILKMGEAD-----------------KEARGLNINENADFIEKAGGMEKI-----------------FNCQQNENDKF
6PROSPECT21gw5b0.0780.9791.570threading_6TNKKGEIFELKAELEAVKKVIAAMTVGKDVLFPDVVNCMQDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCPLIRALAVRTMLCEPLPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLVVLSAVKVLMKFLEMLLKKLAPPLVTLPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKRKAVRAIGRCAIKVEQSAERCVSTLYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVNADELLES--------FLEGFHDVKLFLKKPSET
7PROSPECT21xm9A0.0760.8331.567threading_7GLTIPKAVQYEKYQAIGAYYIQHTCFQDEAAAGALRNLVFRSTTNKLETVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSG-------WCVVDP------EVFFNATGCLRNLSSADAGRQTMRNY------------SGLIDSLMAYVQNCVAVENCMCVLHNLSYRLDAEVPTRYRQLEYNPKGSGWLYHSDAIRTYLNLMGKSKK-----------------DATLEACAGALQNLTASKGLMSSGMSQLIGLGLPQIARLLQSGNSDVVRSGASLLSNMSVMGNQVFPEVTRLLTSHT--------GNTSNSEDILSSACYTVRNLM-------------ASQPQLAKKELQGVL
8MUSTER1pw4A0.1520.9020.768threading_8EID-PTYRRLRWQIFLGIFFGYAAY--LVKNFALAMPYLVESRGDLGFALSGIS--I-GNPRVFLPAGLILAAAVMLFMGFVPWATAVMFVLLFLCGWFQGMGWPPCGRT-SQGIVSVWNCAHNVGGGIPPLLFLLGMAWF--GLPPIEEYKNDTAKQIFMQYVLNKLLWYIAIANVFVYLLRYGILDWSPTVKHFLDKSSWAYFLYEYAGIPGTLLCGWMSDKVFR-------GNRGATGFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLI-PKKAAGTAAGFTGLFGYLGGSVAAS---AIVGYTVDFFG---WD------GGFMVMIGGSILAVILL------IVVMIG--EKRRHEQLLQELV
9SPARKS2xwub0.0880.9020.941threading_9TIDVNYSDVVPGLIGLIVQLADTVMFT----IGALSEWLADHPVMINSVLPLVLHALGNPEL--SVSSVSTLKKICRECKYDLPPYAANIVAVSQDVLMKQ-------IHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYQLEAEEIPNPSNKLAIVHILGLLSNLFTTLDIPVVVVLQQVFQLIQNDAQVVEAVCAIFEKSVKTLLDDFAPVPQLCEMLGRMY---STIPQASALDLTRQLVHIFA---HEPAHF--PPIEALFLLVTSVTLTLFQQGPRDHPDIVDSFMQLLAQALKR----KPDLFRLDVKAVFQCAVLALKFPEPTVKASCGFFTELLPRC------------GEVEGKVVQEDGRMLL
10PROSPECT21ejlI0.1120.9421.560threading_10GTVNWSVEDIVKGIQATQAARKLLSREKQPLIPKFVSFLGKTDCSPFESAWALTNIASGTSEQTKAVVPAFISLLAHISEQAVWALGNIASAFRDLVIKHGAIDPLLALLAVPDLSTLACGYL--------RNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLL---SAKDTKIIQVILDAISNIFQAAE-----------KLGETEKLSIHENEFS

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.890 to 1kpkA
SCOP code=f.20.1.1
TM-score=0.541 to 1u6gC
SCOP code=a.118.1.2
TM-score=0.424 to 1r6tA
SCOP code=a.16.1.3
TM-score=0.414 to 1sziA
SCOP code=a.24.23.1
TM-score=0.650 to 1ialA
SCOP code=a.118.1.1