Template-based Modeling Results for CDH_ECOLI


  Submitted Primary Sequence

>Length 251
MKKAGLLFLVMIVIAVVAAGIGYWKLTGEESDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVRKQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPFMMLAEEVPEAREHMGRYGLAMVRQSDNSFVLLATQRNLLTLNRASAEEIQDHQCEILR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKAGLLFLVMIVIAVVAAGIGYWKLTGEESDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVRKQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPFMMLAEEVPEAREHMGRYGLAMVRQSDNSFVLLATQRNLLTLNRASAEEIQDHQCEILR
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHCCCCCCCCEEECCCCCEEEECCCCCCCEEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCCCCEEEEHHHCCHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEEECHHHHCCCCHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHCCCHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKAGLLFLVMIVIAVVAAGIGYWKLTGEESDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVRKQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPFMMLAEEVPEAREHMGRYGLAMVRQSDNSFVLLATQRNLLTLNRASAEEIQDHQCEILR
44310110000000000000000130223301200300122011223233220200102332100002122110100000013131130120023211000010010011003312330233000000114212122100000000233013102322331223001011203212000110132212330001100230130332002000000213341000000212212223110220222103125
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKKAGLLFLVMIVIAVVAAGIGYWKLTGEESDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVRKQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPFMMLAEEVPEAREHMGRYGLAMVRQSDNSFVLLATQRNLLTLNRASAEEIQDHQCEILR
1MUSTER2pofA0.9630.8533.564threading_1------------------------------SDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQ-YLLPTYRINGTESPLLTDPSTPNFFWLAWQARDF-SKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPF--LAEEVPEARE-HGSYGLAVRQ-SDNSFVLLATQRNLLTLNRASAEEIQDHQCEIL-
2SPARKS2pofa0.9720.8537.337threading_2------------------------------SDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLL-PTYRINGTESPLLTDPSTPNFFWLAWQARD-FSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPF--LAEEVPEARE-HGSYGLAVR-QSDNSFVLLATQRNLLTLNRASAEEIQDHQCEIL-
3PROSPECT22pofA0.9720.8534.281threading_3------------------------------SDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYL-LPTYRINGTESPLLTDPSTPNFFWLAWQARDF-SKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPF--LAEEVPEARE-HGSYGLAVR-QSDNSFVLLATQRNLLTLNRASAEEIQDHQCEIL-
4PPA-I2pofA0.9630.8538.924threading_4------------------------------SDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQ-YLLPTYRINGTESPLLTDPSTPNFFWLAWQARDF-SKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPF--LAEEVPEARE-HGSYGLAVRQ-SDNSFVLLATQRNLLTLNRASAEEIQDHQCEIL-
5HHPRED-l2pof_A0.9910.85312.908threading_5------------------------------SDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLL-PTYRINGTESPLLTDPSTPNFFWLAWQARDF-SKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPF--LAEEVPEAREH-GSYGLA-VRQSDNSFVLLATQRNLLTLNRASAEEIQDHQCEIL-
6HHPRED-g2pof_A0.9910.85311.155threading_6------------------------------SDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLL-PTYRINGTESPLLTDPSTPNFFWLAWQARDF-SKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPF--LAEEVPEAREH-GSYGLA-VRQSDNSFVLLATQRNLLTLNRASAEEIQDHQCEIL-
7SP32pofa0.9720.8536.648threading_7------------------------------SDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLL-PTYRINGTESPLLTDPSTPNFFWLAWQARD-FSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPF--LAEEVPEARE-HGSYGLAVR-QSDNSFVLLATQRNLLTLNRASAEEIQDHQCEIL-
8SAM-T992pofA0.9670.8539.813threading_8------------------------------SDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLL-PTYRINGTESPLLTDPSTPNFFWLAWQARDF-SKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPF--LAEEVPE-AREHGSYGLAV-RQSDNSFVLLATQRNLLTLNRASAEEIQDHQCEIL-
9MUSTER1y23B0.1490.5340.643threading_9---------------------------------------ENCIFCKIIAGDI-PSAKVYEDEHVLAFLDISTKGHTLVIPKTHIENVYE---FTDE---LAKQYFHAVPKIARAIRDEFEPIGLNTLNNNKAGQSVFHYHMHI---RYG--------GDGFGAVWKTHADDY----------KPEDLQN--ISSSIAKRLASS------------------------------------------------
10SPARKS3lb5a0.1490.4820.962threading_10---------------------------AYDNNIFAKLIRNE-----------IPSVRVYEDDDVIAFMDIMAPGHTLVIPKKGSRNLLD------ADTETLFPVIKAVQKIAKAVKKAFQADGITVMQFAASQQTVYHLHFHIIPRMEGITEILEENAKKIRAAL--------------------------------------------------------------------------------------

  Predicted Tertiary Structure

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TM-score=0.922 to 2pofA
SCOP code=d.13.1.4
TM-score=0.922 to 2pofA
SCOP code=d.13.1.4
TM-score=0.923 to 2pofA
SCOP code=d.13.1.4
TM-score=0.923 to 2pofA
SCOP code=d.13.1.4
TM-score=0.922 to 2pofA
SCOP code=d.13.1.4