Template-based Modeling Results for CHBR_ECOLI

Submitted Primary Sequence

>Length 280
MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ
CCCCHHCCCCCHHHEEEEECCCCCEEEEEECCCCCCCCCEECCCEEEEEEEECEEEEEECCEEEEECCCEEEEECCCCCEEEEECCCCCEEEEEEECHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ
5511221133022011221131420200002323211210001101000002020101031230202400000001111010012322110000001330012102211221111231132232012002200210222221012001000010011022123333233222102100120013211230203100320210231002001311320012001101020013114223220210022011210100030014123000310343134235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ
1	MUSTER	3gbgA	0.135	0.900	2.503	threading_1	---------------------KKSFQTNVYRMSKFDFNNLYINDYKMFWIDSGIAKLIDKNVSYEINSSSIILLKKNSIQRFSLTDENINVSVITISDSFIRSLKSYILGNKDLL--LWNCEHNDIAVLSEVVNGF-REINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLD-AMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESR-GVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV--
2	SPARKS	3gbga	0.135	0.900	3.598	threading_2	---------------------KKSFQTNVYRMSKFDFNNLYINDYKMFWIDSGIAKLIDKLVSYEINSSSIILLKKNSIQRFSLTSLSDNVSVITISDSFIRSLKSYILGNKDLL--LWNCEHNDIAVLSEVVNGFREINY-SDEFLKVFFSGFFSKVEKKYNSIFITD-DLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELES-RGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV--
3	PROSPECT2	3gbgA	0.131	0.900	3.993	threading_3	---------------------KKSFQTNVYRMSKFDFNNLYINDYKMFWIDSGIAKLIDKNVSYEINSSSIILLKKNSIQRFSLSDENINVSVITISDSFIRSLKSYILGNKDLL--LWNCEHNDIAVLSEVVNGFREINYSDEF-LKVFFSGFFSKVEKKYNSIFITDDLDAMEK-ISCLVKSDITRNWRWADICGELRTNRMILKKELES-RGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLT--GV
4	PPA-I	3gbgA	0.135	0.900	3.140	threading_4	---------------------KKSFQTNVYRMSKFDFNNLYINDYKMFWIDSGIAKLIDCLVSYEINSSSIILLKKNSIQRFSLTDENINVSVITISDSFIRSLKSYILGNKDLL--LWNCEHNDIAVLSEVVNGF--REINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESR-GVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV--
5	HHPRED-l	3gbg_A	0.137	0.889	3.945	threading_5	---------------------KKSFQTNVYRMSKFDTYILYINDYKMFWIDSGIAK-LIDKVSYEINSSSIILLKKNSIQRFSLLDENINVSVITISDSFIRSLKSYILG----NKDLLNCEHNDIAVLSEVVNGFREIN-YSDEFLKVFFSGFFSKVEKKYNSIFIT-DDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELE-SRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV--
6	HHPRED-g	3gbg_A	0.135	0.871	3.747	threading_6	---------------------KKSFQTNVYRMSKFDTNNLYINDYKMFWIDSGIAK-LIDKVSYEINSSSIILLKKNSIQRFSLLDENINVSVITISDSFIRSLKSYILG---------NCEHNDIAVLSEVVNGFRE-INYSDEFLKVFFSGFFSKVEKKYNS-IFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELE-SRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV--
7	SP3	3gbga	0.127	0.900	3.495	threading_7	---------------------KKSFQTNVYRMSKFDFNNLYINDYKMFWIDSGIAKLIDKNVSYEINSSSIILLKKNSIQRFSLTSLSDNVSVITISDSFIRSLKSYILGNKDLL--LWNCEHNDIAVLSEVVNGFREINY-SDEFLKVFFSGFFSKV-EKKYNSIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELES-RGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV--
8	SAM-T99	2k9sA	0.170	0.357	2.817	threading_8	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------NRVREACQYISDHLADSFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFR--------
9	MUSTER	2k9sA	0.160	0.379	1.302	threading_9	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDNRVREACQYISDHLADSFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCE----
10	SPARKS	2k9sa	0.160	0.379	2.078	threading_10	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDNRVREACQYISDHLADSFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCE----

Predicted Tertiary Structure


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TM-score=0.483 to 1d5yA SCOP code=a.4.1.8	TM-score=0.476 to 1d5yA SCOP code=a.4.1.8	TM-score=0.479 to 1d5yA SCOP code=a.4.1.8	TM-score=0.483 to 1d5yA SCOP code=a.4.1.8	TM-score=0.473 to 1d5yA SCOP code=a.4.1.8