Template-based Modeling Results for CITC_ECOLI


  Submitted Primary Sequence

>Length 352
MFGNDIFTRVKRSENKKMAEIAQFLHENDLSVDTTVEVFITVTRDEKLIACGGIAGNIIKCVAISESVRGEGLALTLATELINLAYERHSTHLFIYTKTEYEALFRQCGFSTLTSVPGVMVLMENSATRLKRYAESLKKFRHPGNKIGCIVMNANPFTNGHRYLIQQAAAQCDWLHLFLVKEDSSRFPYEDRLDLVLKGTADIPRLTVHRGSEYIISRATFPCYFIKEQSVINHCYTEIDLKIFRQYLAPALGVTHRFVGTEPFCRVTAQYNQDMRYWLETPTISAPPIELVEIERLRYQEMPISASRVRQLLAKNDLTAIAPLVPAVTLHYLQNLLEHSRQDAAARQKTPA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFGNDIFTRVKRSENKKMAEIAQFLHENDLSVDTTVEVFITVTRDEKLIACGGIAGNIIKCVAISESVRGEGLALTLATELINLAYERHSTHLFIYTKTEYEALFRQCGFSTLTSVPGVMVLMENSATRLKRYAESLKKFRHPGNKIGCIVMNANPFTNGHRYLIQQAAAQCDWLHLFLVKEDSSRFPYEDRLDLVLKGTADIPRLTVHRGSEYIISRATFPCYFIKEQSVINHCYTEIDLKIFRQYLAPALGVTHRFVGTEPFCRVTAQYNQDMRYWLETPTISAPPIELVEIERLRYQEMPISASRVRQLLAKNDLTAIAPLVPAVTLHYLQNLLEHSRQDAAARQKTPA
CCCHHHEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEEHHCCEEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCEEEEECCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEECCCCEEEHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCCCCHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MFGNDIFTRVKRSENKKMAEIAQFLHENDLSVDTTVEVFITVTRDEKLIACGGIAGNIIKCVAISESVRGEGLALTLATELINLAYERHSTHLFIYTKTEYEALFRQCGFSTLTSVPGVMVLMENSATRLKRYAESLKKFRHPGNKIGCIVMNANPFTNGHRYLIQQAAAQCDWLHLFLVKEDSSRFPYEDRLDLVLKGTADIPRLTVHRGSEYIISRATFPCYFIKEQSVINHCYTEIDLKIFRQYLAPALGVTHRFVGTEPFCRVTAQYNQDMRYWLETPTISAPPIELVEIERLRYQEMPISASRVRQLLAKNDLTAIAPLVPAVTLHYLQNLLEHSRQDAAARQKTPA
5313200221233333201200200332322132202000001222100000001110010000032024310011002100210242402000000213112003301012012121110013212220320021043233323210000010221110011001100320220000003342321213100200120024032010020120000100000110332210120101000200121002101011110231210300110021022003323222330100202222243210001201300332213100400121003102300431333222334335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMFGNDIFTRVKRSENKKMAEIAQFLHENDLSVDTTVEVFITVTRDEKLIACGGIAGNIIKCVAISESVRGEGLALTLATELINLAYERHSTHLFIYTKTEYEALFRQCGFSTLTSVPGVMVLMENSATRLKRYAESLKKFRHPGNKIGCIVMNANPFTNGHRYLIQQAAAQCDWLHLFLVKEDSSRFPYEDRLDLVLKGTADIPRLTVHRGSEYIISRATFPCYFIKEQSVINHCYTEIDLKIFRQYLAPALGVTHRFVGTEPFCRVTAQYNQDMRYWLETPTISAPPIELVEIERLRYQEMPISASRVRQLLAKNDLTAIAPLVPAVTLHYLQNLLEHSRQDAAARQKTPA
1PROSPECT22ozgA0.1140.8691.416threading_1RF------KYTKASQENIQQLGNILEQCFVSFGDGLENFRVIYREQKVAGGLAILPGQIAAVGIAPEYRGDGAAIALIQHTLQEISEQDIP--ISVLYPATQRLYRKAGY--------------EQAGSSCVWEIPTDSIQIQHASLPLEPVVLKNNPIFH-ELYQQQAQLT----------HGYLDRHPAIWQGLNRTLDTETLYSYLIGDKFTQERTRDGSILRLSNPAV--------QSFWTFIANHRSQIDKVTWKSSVIDALTLLLPENVCKALEARGYPLGVEAKSEVTKGGKGELQLDIKGLASLYTLFTPRQLQLTATETALLKATQIFAGESPWI-----DFF
2PROSPECT22i00A0.0960.8321.397threading_2L-------TLKPVEEEHIDQFNELLSYVFQVTEADISKVFGWFHENQLISQIAIYPCGVTGVGTYPEYANHGLMKDLIQTALEEMRQDKQWISYLFPY--NIPYYRRKGWEIMSDKLSFKI-------------RDTQLPKTVPVPGMIERLAVDH--PDVFDVYARFARQNERTAAVYYGANQEPLNQEARNGLWNFITAHVYWVKGDIYKN------EPLAFLLEDSQIKESIEPYVDVKAFLENVAEWNNGIFGLIWDEND-------------------------QVTITDEPLGTAVHLDIQTLTCLVMYRRPSYLHRITDKETLNSLERIFPDQEAYF----SDYF
3SPARKS3pnba0.1940.4403.090threading_3------------------------------------------------------------------------------------------------------------------------------------------------MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRS-------------------------CGMTAIVKGLRTGTDFEYELQMAQMNKHIAG-VDTFFVATAP-----------RYSFVSSSLAKEVAMLGG--DVSELLPEPVNRRLRDRLN--------------
4PROSPECT23r1kA0.0870.8841.349threading_4V-------TLCSPTEDDWPGMFLLAAASFTDFIGPTDGAVVVRDGSEVVGMALYPGEVLSFVAVAPTHRRRGLLRAMCAELHRRIADSGYPVAALH--ASEGGIYGRFGYGPATTLHELTVDRRFARFH-------ADAPGGGLGGSSVRLVRPTEHRGEFEAIYERWRQQVPGGL---------LRPQVLWDELLAECKAAPGGYRVDRTDLARVSELRAVT-------------ADAHCALWRALIGLDSMERISIITHPQDPLPHLLTDTRVPAALEARGYAHEVGEFARCTPTDAAAEIMDRDVLGSLYGAHRASTLAAAKDSQLLRRLDAAFASDVPVQ---TAFEF
5PPA-I1od6A0.2260.4401.961threading_5-------------------------------------------------------------------------------------------------------------------------------------------------MHVVYPGSFDPLTNGHLDVIQRASRLFEKVTVAVL-ENQYLFSAEERLAIIREATAHLANVEAATFSG-------------------------LLVDFVRRVGAQAIVKGLRAVSDYEYELQMAHLNRQLY----------PGLETLFILA-ATRYSFVSSTMVKEIARYGG--DVSKLVPPATLRALKAKLGQ-------------
6MUSTER3gmiA0.1460.7020.802threading_6-----------------------------------------------------------------------------QAMLIGEIMDL------------NLKNFLE----------DREEIIRDAKRKDEKSFKDFKKIRENKDKIVCDFTEYNPLHKGHKYALEKGKEHGIFISVLPERSGRYFLNRYIRAEMAIRAGADGPPMGIMGSGQYMRCLIKMFYSLYIPEKTMEKVIDCINKGYIQVKPYKIICIETGEILGEKLNYVIASMSQMIYKLNRE--GLKFNPKFVFVKR----LEGISGTKIREAIFSGKFEDIKNMLPKTTLSILKELYDNGKELILKRFEDRI
7PROSPECT23gmiA0.1490.7241.606threading_7-------------QAMLIGEIMDLNLK---------------------------------------------NFLEDREEIIRDAK------------RKDEKSFKD----------------------FKKIVEEIKE-RENKDKIVCDFTEYNPLHKGHKYALEKGKEHGIFISVLPGRGIPYFLNRYIRAEMAIRAGADGPPMGIMGSGQYMRCLIKMFYSLGIPEKTMEKVIDCINKGYIQVKPYKIICIETGEILGEKLNIDNYVIASMSQMIYKNREGLKFNPKFVFVKR----LEGISGTKIREAIFSGKFEDIKNMLPKTTLSILKELYDNGKEIKNSLPYGFS
8HHPRED-l3nd5_A0.2170.4321.851threading_8-----------------------------------------------------------------------------------------------------------------------------------------------MRKIALFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFI----LFTPEEKKYLIEEATKEMPNVRVIMQET------------------------QLTVESAKSLGANFLIRGIRNVKDYEYEKDIAKMNQHLAPEIETVFLLAEE-------P----YAHVSSSLLKEVLRFGG--DVSDYLPPNIYHALKQK----------------
9HHPRED-g2qjo_A0.1360.5031.733threading_9------------------------------------------------------------------------------------------------------------------------------------------DPMQTKYQYGIYIGRFQPFHLGHLRTLNLALEKAEQVIIILGSHRRNPWRSPERMAMIEACLSPQKRVHFL----------TVRDWLYSDNLWLAAVQQ-----QVLKIT----GGSNSVVVLGHRKDASSYYLNLFPQWD--------YLETG-------HYPDFSSTAIRGAYFEGKEGDLD-KVPPAIADYLQTFQ--KSERYIAYKQAWA
10SP33pnba0.1940.4403.461threading_10------------------------------------------------------------------------------------------------------------------------------------------------MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRS-------------------------CGMTAIVKGLRTGTDFEYELQMAQMNKHIA-GVDTFFVATAP-----------RYSFVSSSLAKEVAMLGG--DVSELLPEPVNRRLRDRLN--------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.597 to 2ozgA
SCOP code=d.106.1.4
TM-score=0.643 to 2i00C
SCOP code=d.106.1.4
TM-score=0.702 to 1tfuA
SCOP code=c.26.1.3
TM-score=0.477 to 2i00C
SCOP code=d.106.1.4
TM-score=0.707 to 1od6A
SCOP code=c.26.1.3