Template-based Modeling Results for CLS_ECOLI


  Submitted Primary Sequence

>Length 486
MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLAVGELHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAPLFKLCERRQGIAGVKGNQLQLMTESDDVMQALIRDIQLARHNIEMVFYIWQPGGMADQVAESLMAAARRGIHCRLMLDSAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRRMDLRQHRKMIMIDNYIAYTGSMNMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIYSCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPEDLIHQALLTAAYSAREYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSMLVGWASRAFFTELLAAGVKIYQFEGGLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLAIDDKGFGADLAAVQDDYISRSRLLDARLWLKRPLWQRVAERLFYFFSPLL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLAVGELHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAPLFKLCERRQGIAGVKGNQLQLMTESDDVMQALIRDIQLARHNIEMVFYIWQPGGMADQVAESLMAAARRGIHCRLMLDSAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRRMDLRQHRKMIMIDNYIAYTGSMNMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIYSCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPEDLIHQALLTAAYSAREYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSMLVGWASRAFFTELLAAGVKIYQFEGGLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLAIDDKGFGADLAAVQDDYISRSRLLDARLWLKRPLWQRVAERLFYFFSPLL
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHCCEEEEEECCEEEECCEEECCHHHCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHCEECCHHHHHHCCHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLAVGELHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAPLFKLCERRQGIAGVKGNQLQLMTESDDVMQALIRDIQLARHNIEMVFYIWQPGGMADQVAESLMAAARRGIHCRLMLDSAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRRMDLRQHRKMIMIDNYIAYTGSMNMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIYSCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPEDLIHQALLTAAYSAREYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSMLVGWASRAFFTELLAAGVKIYQFEGGLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLAIDDKGFGADLAAVQDDYISRSRLLDARLWLKRPLWQRVAERLFYFFSPLL
210001000100000000000000010013332122110000012112110100010001231123113203201220141021032033212432222012002002313201003111010012022003000310230331000000001211002100200120043102000001001012112210020034010100100312112111331112212100001020000000000122103332321110000000202001100100010011211331222222231122332221100000112222231002000100110311000001100011200200010032211000001232112000100100011003010200102111000100001110000000100010010101000001032002201210220134122021311341110220021001001211
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLAVGELHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAPLFKLCERRQGIAGVKGNQLQLMTESDDVMQALIRDIQLARHNIEMVFYIWQPGGMADQVAESLMAAARRGIHCRLMLDSAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRRMDLRQHRKMIMIDNYIAYTGSMNMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIYSCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPEDLIHQALLTAAYSAREYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSMLVGWASRAFFTELLAAGVKIYQFEGGLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLAIDDKGFGADLAAVQDDYISRSRLLDARLWLKRPLWQRVAERLFYFFSPLL
1MUSTER3hsiB0.1640.7921.931threading_1------------------------------------------------------------------------------------------------INKTKRAEQNLNNLPFLAL-QAEQIEFLGSSAEFKTQIIELIRNAKKRIYVTALYWQKDEAGQEILDEIYRVKQEHLDVKVLIDWHRAQRNKSATNADWYCEQRQTYQLPDDPNFFPINTREVFGVLHVKGFVFDDTVLYSGA-SINN-VYLHQFE--KYRYDRYQKITHAELADSVNFINDYLSAVYPLDVTNRPRTKEILKSAVKLPNVLSVSPLGLGASGNELNQVIEDLFLQVQKKLVICTPYFNFPRTLQHKIATLLENGKRVEIIVGDKVANYLYESNLRRFCEKFETQIVRLWRDGDNTYHLKGVWVDDRYILLTGNNLNPRAWRLDAENGLLIYDPQLLAQVEKEQNQIRQHTKVLKLEELNQYPPVQKLLKKFARIKADKL
2HHPRED-l2o8r_A0.1260.7674.902threading_2EDIIKEHLDVVFPGL------------------PDEVLRYICSSCDIDP----EEAIRSGNYVNLQD-----LA--LPNPFAPRLE--TLTPEPLLSKHLPSL-EG---------IRRKDY-LIHVPYYTYDYVVRLL-EAAIEIRLTQYRVAEN---SSIISALEAAAQSGKKVSVFVELKARF---NLRLSER-RRSGIRIVYS------------PGLKVHAKTALILYHIALLSTGNFNETT-------ARIYSDTTL-TANTDIHDVYRLFRILDGDPE-----PA-----------R----FSRLLVARYN-GEAITNLIEREIENVKRY-L---N-GLQDKNVITQLYRASEAGVEIDLIVRGICLVPD-P-QSRNLVD-YLEHS-RIWCFHNG---------GKEEVFISSADW-KRNLYNRIETACPVLDPTLRREIIDILEIQLRDACRIDSSNNIYKNRAQAIYRYLKGKTT---
3HHPRED-g2o8r_A0.1410.7573.687threading_3DA---------------------PTRF-YDGR-PDEVLRYICSSCDIDPEE--AIRSGNYVNLQDLA------LPN-P--FAPRLETLTPEPLLSKHEQAPSL-EGIRR---------KD-YLIHVPYYTYDYVVRLL-EAAIEIRLTQYRVAEN---SSIISALEAAAQSGKKVSVFVELKA--RF-NLRLSER-RRSGIRIVY--S----------PGLKVHAKTALILYHAALLSTGNFNE-T------TARIYSDTTL-TANTDIHDVYRLFRILDGDPE-----PA-------R--------FSRLLVARYN-GEAITNLIEREIENVKRY-L---N-GLQDKNVITQLYRASEAGVEIDLIVPDQSRNIRVTR----LVD-YLEHS-RIWCFHNG---------GKEEVFISSADW-KRNLYNRIETACPVLDPTLRREIIDILEIQLRDNCRIDSSLNIYKHKPVRAQAAIYRYTT---
4PROSPECT23q3eA0.0890.9201.449threading_4TEKACSELLLILKIVYFCTRMATAITTLFSDPVLEISDLGVQRFLVYQRWLALIFASSPFVNADHILQTYTSTAFNKRATILQWFPRHLDQLKNLNNIPSAISHDVYMHCSYDTSVNKHDV-----KRALNHVIRRHIESENKPVMVVLLEFHSAHSIYRTHSTSMIAAREHFYLIGLGSPSVNMKQKLEFIRSVCESNGAAIFYMPSIGMDMTTIFASNTRLAPIQAIALGHPATTHSYVIVEDDYVGSEECFSE---TLLRLPKDA---------------LPYVPSALAPEKVDYLLRENPEVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAPHSPYHQYLRILHNNGIIDMVTLGLVGVCKTGAEVHEHI----------------DEGLFKRLGLPLIANTVDEYVERAVRLAENHQERLELRRYIIENNGLNTPMGQVFLEKLNAFL
5SPARKS3hsia0.1580.7825.309threading_5----------------------------------------------------------------------------------------------------NKTKRAEQNLNNLPFLQAEQIEFLGSSAEFKTQIIELIRNAKKRIYVTALYWQKDEAGQEILDEIYRVKQEHLDVKVLIDWHRAQRNLLATNADWYCEQRQTYQLPDDPNFVPINTREVFGVLHVKGFVFDDTVLYSGA-SINN-VYLH--QFEKYRYDRYQKITHAELANFINDYLLDFSAVYPLDVTNRPREYSLKSAVKLPNVLSVSPLFGLGASGNELNQVIEDLFLQVQKKLVICTPYFNFPRTLQHKIATLLENGKRVEIIVGDKPEQPFKAGALPYLYESNLRRGVRLWRDGDNTYHLKGVWVDDRYILLTGNNLNPRAWRLDAENGLLIYDPQLLAQVEKEQNQIRQHTKVLK--HYTELEELNQYPEPVQKLLKKFA
6PROSPECT23hsiA0.1540.7904.054threading_6-------------------------------------------------------------------------------------------------NKTKRAEQNLNNLPFLAL-QAEQIEFLGSSAEFKTQIIELIRNAKKRIYVTALYWQKDEAGQEILDEIYRVKQPHLDVKVLIDWHRAQRNLLATNADWYCEQRQTYQLPDDPNFVPINTREVFGVLHVKGFVFDDTVLY-SGASINN-VYLHQFE--KYRYDRYQKITHAELADINDYLLDFSAVYPLDVTNRPRGEYSLKSAVKLPNVLSVSPLFGLGASGNELNQVIEDLFLQVQKKLVICTPYFNFPRTLQHKIATLLENGKRVEIIVGDPPEQPFKAGALPYLYESNLRRVVRLWRDGDNTYHLKGVWVDDRYILLTGNNLNPRAWRLDAENGLLIYDPQLLAQVEKEQNQIRQHTKVLKHYTLNQYPEVQKLLKKFARIKADKL
7PPA-I3hsiB0.1530.7923.733threading_7------------------------------------------------------------------------------------------------INKTKRAEQNLNNLPFLAL-QAEQIEFLGSSAEFKTQIIELIRNAKKRIYVTALYWQKDEAGQEILDEIYRVKQEHLDVKVLIDWHRAQRNLAEKNADWYCEQRQTYQLPDDPNFFPINTREVFGVLHVKGFVFDDTVLYSGA-SINNV---YLHQFEKYRYDRYQKITHAELADSVNFINDYLLDFSAVYPLDVTNRPRTKEAVKLPNVLSVSPLFGLGASGNELNQVIEDLFLQVQKKLVICTPYFNFPRTLQHKIATLLENGKRVEIIVGDKVANESNLRRFCEKFETQIESGVRLWRDGDNTYHLKGVWVDDRYILLTGNNLNPRAWRLDAENGLLIYDPQLLAQVEKEQNQIRQHTKVLKLEELNQYPPVQKLLKKFARIKADKL
8HHPRED-l3hsi_A0.1600.7707.492threading_8------------------------------------------------------------------------------------------------NKT-KRAEQNLNNL-PFLALQAEQIEFLGSSAEFKTQIIELIRNAKKRIYVTALYWQKDEAGQEILDEIYRVKQEHLDVKVLIDWHNLL--ANDWYCEQRQTYQLPDDFFGV----PINTREVFGVLHVKGFVFDDTVLYSG-ASINNVYL-HQFE--KYRYDRYQKITHAELADS-VNFINDYLLDFSAVYDVPRILQNGEYSLKSAVKLPNVLSVSPLFSGNELNQVIEDLFLQVQKKLVICTPYFNFPRTLQHKIATLLENGKRVEIIVGDKPEQPFK-AGALPYLYEQIESGVRLWRDGDNTYHLKGVWVDDRYILLTGNNLNPRAWRLDAENGLLIYDPQLLAQVEKEQNQIRQHTKVLKHYTENQYPEPVQKLLKKFARIK-I-
9HHPRED-g3hsi_A0.1680.7707.080threading_9--------------------------------------------------------------------------------------------------NKTKRAEQNLNNLPFLALQAEQIEFLGSSAEFKTQIIELIRNAKKRIYVTALYWQKDEAGQEILDEIYRVKQEHLDVKVLIDWHNLL--AADWYCEQRQTYQLPDDFFVPIN-----TREVFGVLHVKGFVFDDTVLYSG-ASINN-VYLHQFE--KYRYDRYQKITHAELADS-VNFINDYLLDFSAVYNRPRTKEALGEYSLKSAKLPNVLSVSPLFSGNELNQVIEDLFLQVQKKLVICTPYFNFPRTLQHKIATLLENGKRVEIIVGDKPEQPFK-AGALPYLYESIESGVRLWRDGDNTYHLKGVWVDDRYILLTGNNLNPRAWRLDAENGLLIYDPQLLAQVEKEQNQIRQHTKVLKHYTELEYPEPVQKLLKADKLVK-IL
10SP33hsia0.1570.7865.630threading_10-------------------------------------------------------------------------------------------------NKTKRAEQNLNNLPFLA-LQAEQIEFLGSSAEFKTQIIELIRNAKKRIYVTALYWQKDEAGQEILDEIYRVKQEHLDVKVLIDWHRAQRNLLATNADWYCEQRQTYQLPDDPNFVPINTREVFGVLHVKGFVFDDTVLYSGA-SINN-VYL--HQFEKYRYDRYQKITHAELANFINDYLLDFSAVYPLDVTNRPRGEYSLKSAVKLPNVLSVSPLGLGASGNELNQVIEDLFLQVQKKLVICTPYFNFPRTLQHKIATLLENGKRVEIIVGDPPEQYLYESNLRRFCEKFETQIVRLWRDGDNTYHLKGVWVDDRYILLTGNNLNPRAWRLDAENGLLIYDPQLLAQVEKEQNQIRQHTKVLK--HYTELEELNQYPEPVQKLLKKFA

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.598 to 1xdpA
SCOP code=a.7.15.1
TM-score=0.711 to 1xdpA
SCOP code=a.7.15.1
TM-score=0.590 to 1xdpA
SCOP code=a.7.15.1
TM-score=0.726 to 1xdpA
SCOP code=a.7.15.1
TM-score=0.517 to 2iw1A
SCOP code=c.87.1.8