Template-based Modeling Results for COF_ECOLI


  Submitted Primary Sequence

>Length 272
MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGRHALEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASMHIFNDDGWFTGKEIPALLQAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQIQLYEALGERAHLCFSATDCLEVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDREMLVSVGSGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLDYPHLPYSPE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGRHALEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASMHIFNDDGWFTGKEIPALLQAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQIQLYEALGERAHLCFSATDCLEVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDREMLVSVGSGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLDYPHLPYSPE
CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCEEEECCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCHHHHHHHHHCCCCCEECCHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCHHHEEEECCCHHHHHHHHHCCCEEECCCCCHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGRHALEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASMHIFNDDGWFTGKEIPALLQAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQIQLYEALGERAHLCFSATDCLEVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDREMLVSVGSGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLDYPHLPYSPE
20100000021000223330033012001302534010000012102201300030212000000100101113111002220223002200200231400000001110002331220111022122412012133023220110000123310230022014212420200000210010012201101002000320202120000001010002001000000011101210121131120023032300020012002233132235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGRHALEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASMHIFNDDGWFTGKEIPALLQAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQIQLYEALGERAHLCFSATDCLEVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDREMLVSVGSGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLDYPHLPYSPE
1MUSTER1nf2A0.2240.9673.077threading_1MYRVFVFDLDGTLLNDNLEISEKDRRNIEKLSR-KCYVVFASGRMLVSTLNVEKKYKRTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVENLSELSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASD--IVTLTNNDSGVSYVLERISTD--LD----
2SPARKS3niwa0.2080.9384.235threading_2KYKLIVLDLDGTLTNSKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRNEGFILSYNGGEIINWESKE-YENVLPNEVVPVLYECARTNHLSILTYDGAEIVTENLDPYVQKEAFLNKAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGTR-EEVIAIGDGYNDLSIKFAGG---VAGNAQEPVKKAADY--ITLTNDEDGVAEAIERIF----------
3PROSPECT23niwA0.2080.9383.990threading_3KYKLIVLDLDGTLTNSKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRNEGFILSYNGGEIINWESK-EYENVLPNEVVPVLYECARTNHLSILTYDGAEIVTENSLPYVQKEAFLNKAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGT-REEVIAIGDGYNDLSIKFAGG---VAGNAQEPVKKAADY--ITLTNDEDGVAEAIERIF----------
4PPA-I1nf2A0.2200.9714.454threading_4MYRVFVFDLDGTLLNDNLEISEKDRRNIEKLSR-KCYVVFASGRMLVSTLNVEKKYFKTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASD--IVTLTNNDSGVSYVLERISTDCLD-----
5HHPRED-l3pgv_A0.3540.9042.748threading_5-YQVVASDLDGTLLSPDHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSY-ITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRNDKIVTNVYREDEWY-NRHR-----FFKEAVFNYKLYEPGELDPQGISKVFFTCDHEHLLPLEQA-NARWGDRVNVSFSTLTCLEV-AGGVSKGHALEAVAK-LGYTLSDCIAFGDG-NDAE----AGKGCI-ANAHQRLKDLHPELEVIGSNADDAVPRYLRKLYL---------
6HHPRED-g3pgv_A0.3540.9042.461threading_6-YQVVASDLDGTLLSPDHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSY-ITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRNDKIVTNVYREDEWY-NRHR-----FFKEAVFNYKLYEPGELDPQGISKVFFTEDHEHLLPLEQA-NARWGDRVNVSFSTLTCLEV-AGGVSKGHALEAVAK-LGYTLSDCIAFGDG-NDAE----AGKGCI-ANAHQRLKDLHPELEVIGSNADDAVPRYLRKLYL---------
7SP33niwa0.2080.9384.436threading_7KYKLIVLDLDGTLTNSKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRNEGFILSYNGGEIINWESKEY-ENVLPNEVVPVLYECARTNHLSILTYDGAEIVTENSDPYVQKEAFLNKAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGT-REEVIAIGDGYNDLSIKFAGG---VAGNAQEPVKKAADY--ITLTNDEDGVAEAIERIF----------
8SAM-T991rkqA0.2270.9563.763threading_8-IKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMGDYCITYNGALVQKAAGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPFLKVMMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANF--VTKSNLEDGVAFAIEKYVL---------
9MUSTER1rkqA0.2370.9633.016threading_9AIKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEDYCITYNGALVQKADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRSYYTVHESFVATIPLVFCEAEKMPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVAN--FVTKSNLEDGVAFAIEKYVLN--------
10SPARKS3r4ca0.2200.9384.138threading_10MIKVLLLDVDGTLLSFEHKVSQSSIDALKKVHDSGIKIVIATGRAASDLHEI-DAVPYD-GVIALNGAECVLRDGSVIRKVAIPAQDFRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPVVDIEEMERKECCQLCFYFDEEAEQKVMPLLS-----GLSATRWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADF--VTDTVDNSGLYKALKHFGVI--------

  Predicted Tertiary Structure

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TM-score=0.972 to 1nf2A
SCOP code=c.108.1.10
TM-score=0.975 to 1nf2A
SCOP code=c.108.1.10
TM-score=0.869 to 1nf2A
SCOP code=c.108.1.10
TM-score=0.877 to 1nf2A
SCOP code=c.108.1.10
TM-score=0.977 to 1nf2A
SCOP code=c.108.1.10