Template-based Modeling Results for DAPE_ECOLI


  Submitted Primary Sequence

>Length 375
MSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMDFADTQNFWAWRGQGETLAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPNHTGRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLVGEPSSIEVVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIEWDQGNEFFPATSMQIANIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLEKHQLRYTVDWWLSGQPFLTARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQLLARMYQRIMEQLVA
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMDFADTQNFWAWRGQGETLAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPNHTGRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLVGEPSSIEVVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIEWDQGNEFFPATSMQIANIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLEKHQLRYTVDWWLSGQPFLTARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQLLARMYQRIMEQLVA
CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEECCCEEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMDFADTQNFWAWRGQGETLAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPNHTGRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLVGEPSSIEVVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIEWDQGNEFFPATSMQIANIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLEKHQLRYTVDWWLSGQPFLTARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQLLARMYQRIMEQLVA
453301210220041302123221001001200340202011021231300001114130000000000011021331211113020221000010000010000000000220122223230200000001132213300120020013233301000001012242111001103200000101020010001113202000110010021012122332231121100000002112212100011010100010024212310121022004324220201010113121224030020002002312423010100010100100131102000001112201212100102102200200120022115
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMDFADTQNFWAWRGQGETLAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPNHTGRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLVGEPSSIEVVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIEWDQGNEFFPATSMQIANIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLEKHQLRYTVDWWLSGQPFLTARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQLLARMYQRIMEQLVA
1MUSTER3ic1A0.6020.9843.436threading_1MKEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHGTSPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGSITGNLYIQG----IQYPHLAENPIHKAALFLQELTTYQWDKGNEFFPPTSLQIANIHAGTG--SVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEKHNLKYRIEWNLSGKPFLTKPGKLLDSITSAIEETIGITPKAETGGGTSDGRFIALMGAEVVEFGPLNSTIHKVNECVSVEDLGKCGEIYHKMLVNLLD
2SPARKS3pfoa0.2140.9575.297threading_2NFNDQVAFLQ-RVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSLADVDQVVATAGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWI-GRGAQDKGGVSAIFALDAIRT--AGYAPDARVHVQTVTEEESTG-NGALSTL-----RGYRADACLIPEPT-----GHTLTRAQVGAVWFRLRVRGTPVHVAYSETGTSAILHLIRAFEEYTKELNAQAGQVKNPIKFNVGIIKGGDWA-SSTAAWCELDCRLGLLTGDTPQEARGIEKCLADAQATPAELVWSFQADPAVCEPGVAEDVLTAAHKAAFNAPLDARLSTAVNDTRYYSVYGIPALCYGPYGQGPHAFDERIDLESLRKTTLSIALFVAEWCG
3PROSPECT23ic1A0.6020.9845.562threading_3MKEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHGTEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGSITGNLYIQG----IQYPHLAENPIHKAALFLQELTTYQWDKGNEFFPPTSLQIANIHAGTG--SVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEKHNLKYRIEWNLSGKPFLTKPGKLLDSITSAIEETIGITPKAETGGGTSDGRFIALMGAEVVEFGPLNSTIHKVNECVSVEDLGKCGEIYHKMLVNLLD
4PPA-I3ic1A0.6020.9845.158threading_4MKEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHGTSPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGSITGNLYIQG----IQYPHLAENPIHKAALFLQELTTYQWDKGNEFFPPTSLQIANIHAGTG--SVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEKHNLKYRIEWNLSGKPFLTKPGKLLDSITSAIEETIGITPKAETGGGTSDGRFIALMGAEVVEFGPLNSTIHKVNECVSVEDLGKCGEIYHKMLVNLLD
5HHPRED-l1vgy_A0.5650.9813.169threading_5-TTQSLELAKELISRPSVTPDDRDCQKL-AERLHKIGFAAEE-HFGNTKNIWLRRGKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAAD-KTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEPTAVDKLGD-IKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEGNEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDKHGVQYDLQWSCSGQPFLTQAGKLTDVARAAIAETCGIEAELSTTGGTSDGRFIKA-AQELIELGPSNATIHQINENVRLNDIPKLSAVYEGILVRLL-
6HHPRED-g1vgy_A0.5650.9813.131threading_6-TEQSLELAKELISRPSVTPDDRDCQKL-AERLHKIGFAAEE-HFGNTKNIWLRRGKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAAD-KTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEPTAVDKLGD-IKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEGNEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDKHGVQYDLQWSCSGQPFLTQAGKLTDVARAAIAETCGIEAELSTTGGTSDGRFIKA-AQELIELGPSNATIHQINENVRLNDIPKLSAVYEGILVRLL-
7SP33tx8a0.2410.9285.509threading_7LLGDPIVLTQRLVDIPSPSGQEKQIADEIEDALRNLNLPVEVFRFNN--NVLARTNRGASRVLAGHIDTVPIAD-------NLPSRVEDG-IYGCGTVDKSGLAVYLHTFATLA--TSTELKHDLTLIAYECEEVADHLNGLGHIRDEHPEWLAADLALLGEPT-----GGWIEAGCQGNLRIKVTAHGVRAHSARSWLGDNAHK-LSPIISKVAAYKAAEVNILTYREGLNIVFCESGV-ANNVIPD-LAWNLNFRFAPNRDLNEAIEHVVETLELDG-QDGIEWAVEDGAGGALPG-LGQQVTSGLIDAVGREKIRAKFGWTDVSRFSA--GIPALNFGAGDPSFHKRDEQCPVEQITDVAAILKQYLSE---
8SAM-T993ic1A0.6020.9845.650threading_8MKEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHGTSPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGSITGNLYIQGIQ----YPHLAENPIHKAALFLQELTTYQWDKGNEFFPPTSLQIANIHAGT--GSVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEKHNLKYRIEWNLSGKPFLTKPGKLLDSITSAIEETIGITPKAETGGGTSDGRFIALMGAEVVEFGPLNSTIHKVNECVSVEDLGKCGEIYHKMLVNLLD
9MUSTER1vgyA0.5580.9843.274threading_9TETQSLELAKELISRPSVTPDDRDC-QKLAERLHKIGFAAEE-HFGNTKNIWLRRGKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADK-TSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEPTAVDKLGD-IKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEGNEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDKHGVQYDLQWSCSGQPFLTQAGKLTDVARAAIAETCGIEAELSTTGGTSDGRFIKA-AQELIELGPSNATIHQINENVRLNDIPKLSAVYEGILVRLL-
10SPARKS3tx8a0.2390.9285.120threading_10LLGDPIVLTQRLVDIPSPSGQEKQIADEIEDALRNLNLPVEVFRFNN--NVLARTNRGASRVLAGHIDTVPIAD-------NLPSRVEDG-IYGCGTVDKSGLAVYLHTFATLA--TSTELKHDLTLIAYECEEVADHLNGLGHIRDEHPEWLAADLALLGEPT-----GGWIEAGCQGNLRIKVTAHGVRAHSARSWLGDNAHK-LSPIISKVAAYKAAEVDGLTYREGLNIVFCESGV-ANNVIPD-LAWNLNFRFAPNRDLNEAIEHVVETLELDGQD-GIEWAVEDGAGGALPG-LGQQVTSGLIDAVGREKIRAKFGWTDVSRFSA--GIPALNFGAGDPSFHKRDEQCPVEQITDVAAILKQYLSE---

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.825 to 1vgyA
SCOP code=c.56.5.4
TM-score=0.830 to 1vgyA
SCOP code=c.56.5.4
TM-score=0.754 to 1vgyA
SCOP code=c.56.5.4
TM-score=0.827 to 1vgyA
SCOP code=c.56.5.4
TM-score=0.825 to 1vgyA
SCOP code=c.56.5.4