Template-based Modeling Results for DCUD_ECOLI


  Submitted Primary Sequence

>Length 455
MFGIIISVIVLITMGYLILKNYKPQVVLAAAGIFLMMCGVWLGFGGVLDPTKSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLKLIRSPYIILSATYVIGQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIFAAQVAGMKIATYFFHYQLPVASCVIISVAISHFFVQRAFDKKDKNINHEQAEQKALDNVPPLYYAILPVMPLILMLGSLFLAHVGLMQSELHLVVVMLLSLTVTMFVEFFRKHNLRETMDDVQAFFDGMGTQFANVVTLVVAGEIFAKGLTTIGTVDAVIRGAEHSGLGGIGVMIIMALVIAICAIVMGSGNAPFMSFASLIPNIAAGLHVPAVVMIMPMHFATTLARAVSPITAVVVVTSGIAGVSPFAVVKRTAIPMAVGFVVNMIATITLFY
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFGIIISVIVLITMGYLILKNYKPQVVLAAAGIFLMMCGVWLGFGGVLDPTKSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLKLIRSPYIILSATYVIGQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIFAAQVAGMKIATYFFHYQLPVASCVIISVAISHFFVQRAFDKKDKNINHEQAEQKALDNVPPLYYAILPVMPLILMLGSLFLAHVGLMQSELHLVVVMLLSLTVTMFVEFFRKHNLRETMDDVQAFFDGMGTQFANVVTLVVAGEIFAKGLTTIGTVDAVIRGAEHSGLGGIGVMIIMALVIAICAIVMGSGNAPFMSFASLIPNIAAGLHVPAVVMIMPMHFATTLARAVSPITAVVVVTSGIAGVSPFAVVKRTAIPMAVGFVVNMIATITLFY
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MFGIIISVIVLITMGYLILKNYKPQVVLAAAGIFLMMCGVWLGFGGVLDPTKSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLKLIRSPYIILSATYVIGQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIFAAQVAGMKIATYFFHYQLPVASCVIISVAISHFFVQRAFDKKDKNINHEQAEQKALDNVPPLYYAILPVMPLILMLGSLFLAHVGLMQSELHLVVVMLLSLTVTMFVEFFRKHNLRETMDDVQAFFDGMGTQFANVVTLVVAGEIFAKGLTTIGTVDAVIRGAEHSGLGGIGVMIIMALVIAICAIVMGSGNAPFMSFASLIPNIAAGLHVPAVVMIMPMHFATTLARAVSPITAVVVVTSGIAGVSPFAVVKRTAIPMAVGFVVNMIATITLFY
21010000000000010002313120000000000000001012211233241211100000210020013201100000000000010032010020001001200330211100000000001000100110100000000000000020100200000000000002101121100100310313000000211010000000000000000220023334322332122322332222110001000001000011113212230101000000000000000200243313300210210020002000100000000200130010010020003003312200100100100010000211110100000001000300220302001000001001101210011000000002012011110011100100000000000000112
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMFGIIISVIVLITMGYLILKNYKPQVVLAAAGIFLMMCGVWLGFGGVLDPTKSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLKLIRSPYIILSATYVIGQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIFAAQVAGMKIATYFFHYQLPVASCVIISVAISHFFVQRAFDKKDKNINHEQAEQKALDNVPPLYYAILPVMPLILMLGSLFLAHVGLMQSELHLVVVMLLSLTVTMFVEFFRKHNLRETMDDVQAFFDGMGTQFANVVTLVVAGEIFAKGLTTIGTVDAVIRGAEHSGLGGIGVMIIMALVIAICAIVMGSGNAPFMSFASLIPNIAAGLHVPAVVMIMPMHFATTLARAVSPITAVVVVTSGIAGVSPFAVVKRTAIPMAVGFVVNMIATITLFY
1SPARKS2xwub0.1220.9581.197threading_1TSSLTLTFWYTLQDDILSFEAEKAVYQQVYRPVYFQLVDVLLHKAQFPSDEEYGFWLGAELLSNLYDKLGRLLTSWQHTEALLYGFQSIAETIDVNYDVVPGLIGLIPRISNVQLADTVMFTIGALSEWLADHPVMINSV-----LPLVLHALGNPELSVSSVSTLKKICRECKYDLPPYAANIVAV-SQDVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNISPYIQQLEKLAEEIPNPSNKLAIVHILGLLSNLFTTLDISHPN----PVVVVLQQVFQLIQKVLSKWLVEAVCAIFEKSVKTLLDDFAPM--VPQLCEMLGRMYSTISALDLTRQLVHIFAHEPAHFPPIEALFLLVTSVTL----TLFQQGPRDHPDIVDSF---MQLLAQALKRKPDLFLCERLDVKAVFQCAVLALKFPEAPTVKASCGFFTELLVESVGKVVQED
2PROSPECT21jdha0.0880.9492.115threading_2AIPELTKLLAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTND------------VETARCTAGTLHNLSHHGLLAIFKSGGIPALVKMLGSPFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILA---YGNQESKLIILALVNIMRTYTYEKLLWTTSRVVCSSNKPAIVEAGGMQALGLHLLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKHWPLIKATVGLIRNLALCPANHAPLRE--------QGAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIIPLFVQLLYSPIEQRVAAGVLCELAQDKEAAIEAEGATAPLTELLTYAAAVLFRMS
3PPA-I1b3uA0.0930.9431.278threading_3PLESLATVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWGLFSVCYPRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASQDSVRLLAVEACVNIAQLL--PQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQ--NLMK-----DCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILG-------------KDNTIEHLLPLFLAQLKDECRLNIISNLDCVNEVIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFD----EKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAANVRFNVAKSL
4SPARKS2bkub0.0990.9561.159threading_4AAAQLIAAIADIELMKIMVDNTGAQPENVKRASLLALGYMCESADALVSS-------SNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKEREGERNYLMQVVCETQAED-IEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTI---CEEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHI-LEPVLEFVEQNITAD--------NWRNREAAVMAFGSIMDGPDKVQRTYYVHQLPSILNLMNDQLQVKETTAWCIGRIADSVAESQHLPGVVQACLIGQDHPKVATNCSWTIINLVEQLAEATPSPIYNYPALVDGLIGAANRIDNEFNARASAFSALTTMVESISTFVMDKLGSVDENQLTLEDAQSLQELQSNILTVLAAVIRKS
5PROSPECT21b3ua0.0790.9761.984threading_5SLYPIAVLINSIKKLSTIALALGVERTRLLPFLVLLALAEQLGTFTTLVGGPEYVHCLLPPLDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDLAVEACVNIAQLLPQEDLEALVMPTLRQAAVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADC---------RENVIMSQILPCIKELVSDANQHALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEV--RLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGHVYAIREAATSNLKKLVEKFGKRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAAKSLQKIGPIL
6PPA-I1xm9A0.0560.8661.263threading_6YLSEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPN-------------QNVQQAAAGALRNLVFRSTTNKLETRRQN-----------GIREAVSLLRRTGNAEIQKQLTGLLWNLSSKEELIADALPVLADRVIIPFSGWCVVDPEVFFNATGCLRNLS---SADAGRQTMRNYSG--------------LIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPT----------RYRQLEYNALPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEK-----GLPQIARLLQSGN-----SDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS
7PROSPECT21ee4a0.0780.8701.957threading_7ELPQMTQQLEQLSATVKFRQHRPPIDVVIQAGVVPRLVEFMRENQP------------EMLQLEAAWALTNIASGTSAQTKVVV-------DADAVPLFIQLLYTGSVEVK--------EQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLQEAIQAVIDVR-------IPKRLVELLSHESTLVQTPALRAVGNI----------VTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVI-----------DANLIPPLVKLLEVAE-DKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRI---IEVTLDALENILKMGEADKEARGLNINENADFIEKAGMEKIFNCQEKAYKIIETYF
8PPA-I3o7pA0.1000.8791.188threading_8-------------------RSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFFQAGLIQSAFYFGYFIIPI--PAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGGHFRLNLAQT---FASFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQF---------CYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQY-----PTIFSLGIK------NLGQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAGNIPTA-----------ELIPALCFAVIFIFARF
9PROSPECT21w63A0.1030.9411.914threading_9MCAAIRSSFNVAKLLYMHMLGYPAHFGQLECRIGYLGAMLLLDERQ---------DVHLLMTNCIKNDLNHSTQFVQGLALCTLGCRDLAGEVKAALCAVHVIRKVPELMEMFLPAHGVLHTSVVLLTEMCERSPDMLAHFVPQLVRILKNSGISDPFLQVRILRLLRILGRNDDDSSEAMNDI----LAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRH--------RSTIVIKRRAMELSFALVNGNNIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTA-----GSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVA-AWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISVTRGYALTAIMKLSTRF
10PPA-I1kpkA0.1190.8481.173threading_10KTPLAILFMAAVVGTLVGLA-----AVAFDKGVAWLQNQRMGALVHTADN--------------YPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSGIPEIEGALEDQRPVRWWRVLPVKFFGGLGTLGGGMTVQIGGNIGRMVLDIFRLKGDETLLATGAAAGLAAAFNAPLAGILFIIEEMRPQF-------RYTLISIKAVFIGVIMSTIMYRIFNHEVALID-----VGKLSDAPLNT------LWLYLILGIIF------------GIFGPIFNKWVLGMQDLLHRVHGGN-------------ITKWVLMGGAIGGLCGLLGFATSGGGFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAVLGTAFGMVAVELFPQYHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQ-------LILPMIITGLGATLLAQFTGG

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.549 to 2q6hA
SCOP code=f.54.1.1
TM-score=0.621 to 1m8xA
SCOP code=a.118.1.8
TM-score=0.659 to 1ialA
SCOP code=a.118.1.1
TM-score=0.782 to 1b3uA
SCOP code=a.118.1.2
TM-score=0.898 to 1kpkA
SCOP code=f.20.1.1