Template-based Modeling Results for DMSC_ECOLI


  Submitted Primary Sequence

>Length 287
MGSGWHEWPLMIFTVFGQCVAGGFIVLALALLKGDLRAEAQQRVIACMFGLWVLMGIGFIASMLHLGSPMRAFNSLNRVGASALSNEIASGSIFFAVGGIGWLLAMLKKLSPALRTLWLIVTMVLGVIFVWMMVRVYNSIDTVPTWYSIWTPMGFFLTMFMGGPLLGYLLLSLAGVDGWAMRLLPAISVLALVVSGVVSVMQGAELATIHSSVQQAAALVPDYGALMSWRIVLLAVALCLWIAPQLKGYQPAVPLLSVSFILLLAGELIGRGVFYGLHMTVGMAVAS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MGSGWHEWPLMIFTVFGQCVAGGFIVLALALLKGDLRAEAQQRVIACMFGLWVLMGIGFIASMLHLGSPMRAFNSLNRVGASALSNEIASGSIFFAVGGIGWLLAMLKKLSPALRTLWLIVTMVLGVIFVWMMVRVYNSIDTVPTWYSIWTPMGFFLTMFMGGPLLGYLLLSLAGVDGWAMRLLPAISVLALVVSGVVSVMQGAELATIHSSVQQAAALVPDYGALMSWRIVLLAVALCLWIAPQLKGYQPAVPLLSVSFILLLAGELIGRGVFYGLHMTVGMAVAS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MGSGWHEWPLMIFTVFGQCVAGGFIVLALALLKGDLRAEAQQRVIACMFGLWVLMGIGFIASMLHLGSPMRAFNSLNRVGASALSNEIASGSIFFAVGGIGWLLAMLKKLSPALRTLWLIVTMVLGVIFVWMMVRVYNSIDTVPTWYSIWTPMGFFLTMFMGGPLLGYLLLSLAGVDGWAMRLLPAISVLALVVSGVVSVMQGAELATIHSSVQQAAALVPDYGALMSWRIVLLAVALCLWIAPQLKGYQPAVPLLSVSFILLLAGELIGRGVFYGLHMTVGMAVAS
53201110010000000000000000000010213232311220100000000000000000002000011001001201101101100000000000000000100221020011000000000000000000100110320101101000000000000000000000010122212002000000000000000000010020120110021003202210000001000000000000002132232111000000000000200000000001010011134
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMGSGWHEWPLMIFTVFGQCVAGGFIVLALALLKGDLRAEAQQRVIACMFGLWVLMGIGFIASMLHLGSPMRAFNSLNRVGASALSNEIASGSIFFAVGGIGWLLAMLKKLSPALRTLWLIVTMVLGVIFVWMMVRVYNSIDTVPTWYSIWTPMGFFLTMFMGGPLLGYLLLSLAGVDGWAMRLLPAISVLALVVSGVVSVMQGAELATIHSSVQQAAALVPDYGALMSWRIVLLAVALCLWIAPQLKGYQPAVPLLSVSFILLLAGELIGRGVFYGLHMTVGMAVAS
1MUSTER3zuxA0.1230.9340.959threading_1I-GKTFSLWAALFAAAAFFYIPWLLGIIMFGMGLTLKPSDFDILFK-----PKVVIIGVIAQFAIM--PATAWCLSKLLN---LPAEIAVGVILVGCGTASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEMLIQAAGMLMSIVKMVLLPIVLGLIVHKVL---SKTEKLTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTYDAQKALTIEV-----QNSGLAAALAAAHFAVVAVPGALFSVHNISGSLLAT
2SPARKS2bkub0.0970.9720.891threading_2DDWNVSMSAGACLQLFAQNC-GNHILEPVLEFVEQNITADNWRNREAAVMAFGSIMDGPDKVQRTY-YVHQALPSILNLMND--QSLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLPKVATNCSWTIINLVEQLA--EATPSPIYNFYPALVDGLIGAAN--RIDNEFNARASAFSALTTMVEYATDTVAETSASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISA
3PROSPECT21ee4a0.1181.0001.574threading_3LNSDDMQEQLSATVKFRQILLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIIWALGNVADYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCWSVVSQALPTLAKDTETLVDACWAISYLQEAIQAVIDVRIPKRLVELLSHESTLVQTPALQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNILIPPLVKLLEVAEDKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEADKEARGLNINENADFIE
4PPA-I3zuxA0.1400.8711.038threading_4FDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLP-----------AEIAVGVILVGCCP-----GGTASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEMLEIQAAGMLMSIVKMVLLPIVLGLIVHKV--LGSKTEKLTDALPLVSVAAIVLIIGAVVGA---SKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALT--IEVGMQN----SGLAAALAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKA----------
5HHPRED-l2vpz_C0.1960.8195.270threading_5NAQEFWHWTNALHFVLVGLAGGVALLAALLHLKGDAEA---RRYT---LYALMLIALDLFILWA--ESPARFFTHIWHP-TSPIWWGAWGLGLGFLTGGLLYLG---KG----SQRALAWALLVFSLVALSYPGLALAVNLNRPLWNGL-MAGLFPLTALVLALGLAALLKSP--WALFPLRV---LAGASLLLAL---LYPL----TLPP-EARGH-LLEEAGF---WYGLFLLLGLGTF----WQERLA--PWAG---LLAAAG---LRALLAGQWQGL------
6HHPRED-g2vpz_C0.2080.8226.115threading_6AQEFW-HWTNALHFVLVGLAGGVALLAALLHLKGDAEA---RRYT---LYALMLIALDLFILWA--ESPARFFTHIWHP-TSPIWWGAWGLGLGFLTGGLLYLG---KG----SQRALAWALLVFSLVALSYPGLALAVNLNRPLWNGL-MAGLFPLTALVLALGLAALL-K--SP--WALFPLRVLAGASLLLALLYP----LTL---PP--EARGHLLEEA-G--FWYGLFLLLGLGTF----WQERLA--PWAG---LLAAAG-LRALLVLAGQWQ--GL----
7SP32yl4a0.1300.9650.708threading_7LGLAYPERRRLAAAVGFLTMSSVIAPFFLGKIIDNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQTSGQRIVSLFSSILRQEV---AFFDTGELINRLSSDTALLGRSVENLSDGLRAGAQASVGISMMFFV-------SPNLATFVLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGVRTVRAGKEMTEIEKYASKVDHVMQLARKFGATGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGG
8SAM-T992j0vB0.1200.4630.551threading_8------------------------------------------------------------------------------------------------------------GSHMSVSKFIKCVTVGDGAVGKTCMLICYT-SNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKLDLRDDKGYLA---------------------------------------------
9MUSTER2vpyC0.2130.8010.914threading_9AQEFWH-WTNALHFVLVGLAGGVALLAALLHLKGDA------EARRYTLYALMLIALDLFILWAE--SPAR-----FRFTHIWLTSPIWWGAWGLGLGFLTGGLLYLGKGSQ---RALAWALLVFSLVALSYPGLALAVNLNRPLW-NGLMAGLFPLTALVLALGLAALL------SPWALFPLRVLAGASLLLALLYP---------LTLPPEARGHLLEEAG---FWYGLFLLLGLGTFLAPWA-----LLAAAGLRALLVLAGQWQGL----------------
10SPARKS3m1ic0.1010.9620.884threading_10ITRKWKLLP--------NDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQEWPQNWP-EFIPELIGSSSSVNVCENNMIVLKLLSEEVFDFQAKALHLKNSMSKFEQIFKLCFQVLEQGSSSSLIVATESLLRYLH-WIPYRYIYETNILELLS-TKFMTSPDTRAITLKCLTEVSNLDLIKRQTVLFFQNTLQQIATADLKATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLRELFKTTLDYWHNLVADLFYE

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.428 to 1pw4A
SCOP code=f.38.1.1
TM-score=0.455 to 1j30A
SCOP code=a.25.1.1
TM-score=0.698 to 1qgkA
SCOP code=a.118.1.1
TM-score=0.709 to 1ialA
SCOP code=a.118.1.1
TM-score=0.433 to 1cpcB
SCOP code=a.1.1.3