Template-based Modeling Results for SDHD_ECOLI


  Submitted Primary Sequence

>Length 442
MENAKMNSLIAQYPLVKDLVALKETTWFNPGTTSLAEGLPYVGLTEQDVQDAHARLSRFAPYLAKAFPETAATGGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHLVWATGGGMVPEEEMNQYLAKGR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MENAKMNSLIAQYPLVKDLVALKETTWFNPGTTSLAEGLPYVGLTEQDVQDAHARLSRFAPYLAKAFPETAATGGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHLVWATGGGMVPEEEMNQYLAKGR
CCCCCHHHHHHCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHCHHHHHHCCCCCCCCEECHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHCHHHHHHCCCCHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MENAKMNSLIAQYPLVKDLVALKETTWFNPGTTSLAEGLPYVGLTEQDVQDAHARLSRFAPYLAKAFPETAATGGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHLVWATGGGMVPEEEMNQYLAKGR
5543313211321210210121220000011122123213200012300220131023002100300130022122130300202201320142123322020001222212210002000000100010131023122222333123112230132223100000010100100000023020200000023032111210432201001122111100310130043231000012311210010000001201210242222122311100000001000000000001311233010000102201000100222222102133121322100200002301210030023102100001130002000100332102011010000000120011121132221223213311000000211211321022113325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMENAKMNSLIAQYPLVKDLVALKETTWFNPGTTSLAEGLPYVGLTEQDVQDAHARLSRFAPYLAKAFPETAATGGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHLVWATGGGMVPEEEMNQYLAKGR
1MUSTER3r0xA0.8610.9623.162threading_1---ENIQKLIARYPLVEDLVALKETTWFNPGATSLAQGLPYVGLTEQDVNAAHDRLARFAPYLAKAFPQTAAAGG-IESDVVAIPA-QKRLEKEYGQTI-NGELLKKDSHLAISGSIKARGGIYEVLTHAEKLALEAGLLTTDDDYSVLLSPEFKQFFSQYSIAVGSTGNLGLSIGISA-CIGFKVTVHSA-DARAWKKAKLRSHGVTVVEYEDDYGVAVEQGRKAAQSDPNCFFIDDENSRTLFLGYAVAGQRLKAQFAQQGRVVDASHPLFVYLPCGVGGGPGGVAFGLKLAFGDNVHCFFAEPTHSPC-LLGVYTGLHDAISVQDIGIDNLTAADGLAVGRASGFVGRAER-LLDGLYTLDDQTYD--LGWLAQEEGIRLEPSALAG-AGPQRICASVAYQQRHGFSQTQLGNATHLVWATGGGVPED--EEQYLAK--
2SPARKS3ss7x1.0000.9897.977threading_2-----MNSLIAQYPLVKDLVALKETTWFNPGTTSLAEGLPYVGLTEQDVQDAHARLSRFAPYLAKAFPETAATGGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHLVWATGGGMVPEEEMNQYLAKGR
3PROSPECT23r0xA0.8090.9624.481threading_3---ENIQKLIARYPLVEDLVALKETTWFNPGATSLAQGLPYVGLTEQDVNAAHDRLARFAPYLAKAFPQTAAAGG-IESDVVAIPAQKRLEKEY--GQTINGELLKKDSHLAISGSIKARGGIYEVLTHAEKLALEAGLLTTDDDYSVLLSPEFKQFFSQYSIAVGSTGNLGLSIGISAC-IGFKVTVHSA-DARAWKKAKLRSHGVTVVEYEDDYGVAVEQGRKAAQSDPNCFFIDDENSRTLFLGYAVAGQRLKAQFAQQGRVVDASHPLFVYLPCGVGGGPGGVAFGLKLAFGDNVHCFFAEPTHSPCLLGVYTGL-HDAISVQDIGIDNLTAADGLAVGRASGFVGRAE-RLLDGLYTLDDQTYDLGWLAQEE--GIRLEPSALAG-AGPQRICASVAYQQRHGFSQTQLGNATHLVWATGGGVPEDEE--QYLA--K
4PPA-I3r0xA0.8540.9624.703threading_4---ENIQKLIARYPLVEDLVALKETTWFNPGATSLAQGLPYVGLTEQDVNAAHDRLARFAPYLAKAFPQTAAAGG-IESDVVAIPA-QKRLEKEYGQTI-NGELLKKDSHLAISGSIKARGGIYEVLTHAEKLALEAGLLTTDDDYSVLLSPEFKQFFSQYSIAVGSTGNLGLSIGISA-CIGFKVTVHS-ADARAWKKAKLRSHGVTVVEYEDDYGVAVEQGRKAAQSDPNCFFIDDENSRTLFLGYAVAGQRLKAQFAQQGRVVDASHPLFVYLPCGVGGGPGGVAFGLKLAFGDNVHCFFAEPTHSPCLLGVYT-GLHDAISVQDIGIDNLTAADGLAVGRASGFVGRAER-LLDGLYTLDDQTYD--LGWLAQEEGIRLEPSALAG-AGPQRICASVAYQQRHGFSQTQLGNATHLVWATGGGVPED--EEQYLAK--
5HHPRED-l3r0x_A0.8960.9624.115threading_5-EN--IQKLIARYPLVEDLVALKETTWFNPGATSLAQGLPYVGLTEQDVNAAHDRLARFAPYLAKAFPQTAAAGG-IESDVVAIPA-QKRLEKEYGQTINGE-LLKKDSHLAISGSIKARGGIYEVLTHAEKLALEAGLLTTDDDYSVLLSPEFKQFFSQYSIAVGSTGNLGLSIGI-SACIGFKVTVH-SADARAWKKAKLRSHGVTVVEYEDDYGVAVEQGRKAAQSDPNCFFIDDENSRTLFLGYAVAGQRLKAQFAQQGRVVDASHPLFVYLPCGVGGGPGGVAFGLKLAFGDNVHCFFAEPTHSPC-LLGVYTGLHDAISVQDIGIDNLTAADGLAVGRASGFVGRA-ERLLDGLYTLDDQT-YD-LGWLAQEEGIRLEPSALAG-AGPQRICASVAYQQRHGFSQTQLGNATHLVWATGGG-VPEDE-EQYLAK--
6HHPRED-g3r0x_A0.8960.9625.581threading_6-EN--IQKLIARYPLVEDLVALKETTWFNPGATSLAQGLPYVGLTEQDVNAAHDRLARFAPYLAKAFPQTAAAGG-IESDVVAIPA-QKRLEKEYGQTINGE-LLKKDSHLAISGSIKARGGIYEVLTHAEKLALEAGLLTTDDDYSVLLSPEFKQFFSQYSIAVGSTGNLGLSIGI-SACIGFKVTVH-SADARAWKKAKLRSHGVTVVEYEDDYGVAVEQGRKAAQSDPNCFFIDDENSRTLFLGYAVAGQRLKAQFAQQGRVVDASHPLFVYLPCGVGGGPGGVAFGLKLAFGDNVHCFFAEPTHSPC-LLGVYTGLHDAISVQDIGIDNLTAADGLAVGRASGFVGRA-ERLLDGLYTLDDQT-YD-LGWLAQEEGIRLEPSALAG-AGPQRICASVAYQQRHGFSQTQLGNATHLVWATGGG-VPEDE-EQYLAK--
7SP33ss7x1.0000.9897.964threading_7-----MNSLIAQYPLVKDLVALKETTWFNPGTTSLAEGLPYVGLTEQDVQDAHARLSRFAPYLAKAFPETAATGGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHLVWATGGGMVPEEEMNQYLAKGR
8SAM-T993r0xA0.8550.9553.585threading_8---ENIQKLIARYPLVEDLVALKETTWFNPGATSLAQGLPYVGLTEQDVNAAHDRLARFAPYLAKAFPQTAAAGGI-ESDVVAIPAQKRL-EKEYGQTINGE-LLKKDSHLAISGSIKARGGIYEVLTHAEKLALEAGLLTTDDDYSVLLSPEFKQFFSQYSIAVGSTGNLGLSIGI-SACIGFKVTVH-SADARAWKKAKLRSHGVTVVEYEDDYGVAVEQGRKAAQSDPNCFFIDDENSRTLFLGYAVAGQRLKAQFAQQGRVVDASHPLFVYLPCGVGGGPGGVAFGLKLAFGDNVHCFFAEPTHSPCLL-GVYTGLHDAISVQDIGIDNLTAADGLAVGRASGFVGRAERL-LDGLYTLDDQTYD--LGWLAQEEGIRLEPSALAG-AGPQRICASVAYQQRHGFSQTQLGNATHLVWATGGGVDEEQYLA-------
9MUSTER3iauA0.2040.8101.943threading_9MSPI------VSVPDITAPVENVPAIL----PKVVPGELIVNKPTGGDSDELFQYLVDILA---------PVYDVAIESPLELAEKLSDRLG--------VNFYIKRED-KQRVFSF-LRGAYNMMSNL---------------------SREELDK-----VITASAGNHAQGVALAGQRLNCVAKIVMPTTTPQIKIDAVRALGGDVVLYGKTFDEAQTHALELSEKDGL-KYIPPFDDPGVIKGQGTIGTEINRQLKD----IH-----AVFIPVGGGGLIAGVATFFKQI-APNTKIIGVEPYGAASMTLSLHEGHRVKLSNVD------TFADGVAVALVGEYTFAKCQELIDGMVLVANDGISAAIKDVYDEGRNILETSGAVAIAGAAAYCEFYK-----------IKNENIVAIASGANMDF-SKLHKVTELAG
10SPARKS3r0xa0.8680.9626.649threading_10---ENIQKLIARYPLVEDLVALKETTWFNPGATSLAQGLPYVGLTEQDVNAAHDRLARFAPYLAKAFPQTAAAGGI-ESDVVAIPAQ-KRLEKEYGQTI-NGELLKKDSHLAISGSIKARGGIYEVLTHAEKLALEAGLLTTDDDYSVLLSPEFKQFFSQYSIAVGSTGNLGLSIGISA-CIGFKVTVH-SADARAWKKAKLRSHGVTVVEYEDDYGVAVEQGRKAAQSDPNCFFIDDENSRTLFLGYAVAGQRLKAQFAQQGRVVDASHPLFVYLPCGVGGGPGGVAFGLKLAFGDNVHCFFAEPTHSPCL-LGVYTGLHDAISVQDIGIDNLTAADGLAVGRASGFVGR-AERLLDGLYTLDDQTYD--LGWLAQEEGIRLEPSALAG-AGPQRICASVAYQQRHGFSQTQLGNATHLVWATGGGVPEDEE--QYLAK--

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.768 to 1pwhA
SCOP code=c.79.1.1
TM-score=0.767 to 1pwhA
SCOP code=c.79.1.1
TM-score=0.778 to 1ve5A
SCOP code=c.79.1.1
TM-score=0.760 to 1pwhA
SCOP code=c.79.1.1
TM-score=0.766 to 1pwhA
SCOP code=c.79.1.1