Template-based Modeling Results for DUSB_ECOLI

Submitted Primary Sequence

>Length 321
MRIGQYQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSSNPQVWESDKSRLRMVHIDEPGIRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPDVVKSILTEVVNAVDVPVTLKIRTGWAPEHRNCEEIAQLAEDCGIQALTIHGRTRACLFNGEAEYDSIRAVKQKVSIPVIANGDITDPLKARAVLDYTGADALMIGRAAQGRPWIFREIQHYLDTGELLPPLPLAEVKRLLCAHVRELHDFYGPAKGYRIARKHVSWYLQEHAPNDQFRRTFNAIEDASEQLEALEAYFENFA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRIGQYQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSSNPQVWESDKSRLRMVHIDEPGIRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPDVVKSILTEVVNAVDVPVTLKIRTGWAPEHRNCEEIAQLAEDCGIQALTIHGRTRACLFNGEAEYDSIRAVKQKVSIPVIANGDITDPLKARAVLDYTGADALMIGRAAQGRPWIFREIQHYLDTGELLPPLPLAEVKRLLCAHVRELHDFYGPAKGYRIARKHVSWYLQEHAPNDQFRRTFNAIEDASEQLEALEAYFENFA
CEECCEECCCCEEECCCCCCCCHHHHHHHHHHCCCEEEECCEEEHHHHHCCHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCEEEECHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRIGQYQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSSNPQVWESDKSRLRMVHIDEPGIRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPDVVKSILTEVVNAVDVPVTLKIRTGWAPEHRNCEEIAQLAEDCGIQALTIHGRTRACLFNGEAEYDSIRAVKQKVSIPVIANGDITDPLKARAVLDYTGADALMIGRAAQGRPWIFREIQHYLDTGELLPPLPLAEVKRLLCAHVRELHDFYGPAKGYRIARKHVSWYLQEHAPNDQFRRTFNAIEDASEQLEALEAYFENFA
222041203220000001201120011002310010000100001211231330122013233311100000012031002002002311020000001000220133210000022130031002101311412000100001133231012002002401110000002022221213010200210132030000000101102202100321101000000001020100210110132232222121220120011002200322122300210020001003312213201310220330220020022003315
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRIGQYQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSSNPQVWESDKSRLRMVHIDEPGIRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPDVVKSILTEVVNAVDVPVTLKIRTGWAPEHRNCEEIAQLAEDCGIQALTIHGRTRACLFNGEAEYDSIRAVKQKVSIPVIANGDITDPLKARAVLDYTGADALMIGRAAQGRPWIFREIQHYLDTGELLPPLPLAEVKRLLCAHVRELHDFYGPAKGYRIARKHVSWYLQEHAPNDQFRRTFNAIEDASEQLEALEAYFENFA
1	MUSTER	1vhnA	0.318	0.922	3.029	threading_1	---------VKVGLAP-AGYTDSAFRTLAFEWGADFAFSEVSA-KGFLN-SQKTEELL-PQPHERNVAVQIFGSEPNELSEAARILSE-KYKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNE--VEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK--RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKDFLRSGK-YSEPSREEILRTFERHLELLIKTKGERKAVVE--KFLAGYTKDLKGARRFREKVKIVQILKEFYNFIKEVE----
2	SPARKS	3b0pa	0.262	0.941	5.150	threading_2	-------LDPRLSVAPMVDRTDRHFRFLVRQVSLGRLYTEMTVDQAVLRGNRERLL--AFRPEEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETGLAQSVEAMAEAGVKVFVVHARSA---LIPPLRHDWVHRLKGDPQLTFVTNGGIRSLEEALFHLK--RVDGVMLGRAVYEDPFVLEEADRRVFGLP--RRPSRLEVARRMRAYLEEEVL---KGTPPWAVLRHMLNLFRGRPKGRLWRRLLSEGRSLQALDRALRLMEEEVG
3	PROSPECT2	3b0pA	0.241	0.944	4.056	threading_3	L-------DPRLSVAPMVDRTDRHFRFLVRQVSLGRLYTEMTVDQAVLRGNRER--LLAFRPEEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETGLAQSVEAMAEAGVKVFVVHARSA-LIPPLRHDW-VHRLKGDFPQLTFVTNGGIRSLEEALFHL--KRVDGVMLGRAVYEDPFVLEEADRRVFGLPRRPS-----RLEVARRMRAYLEEEVLKGTPPWAVLRHMLNLFRGRPKGRLWRRLLSEGRSLQALDRALRLMEEEVG
4	PPA-I	3b0pA	0.258	0.941	5.929	threading_4	-------LDPRLSVAPMVDRTDRHFRFLVRQVSLGRLYTEMTVDQAVLRGN--RERLLAFRPEEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETGLAQSVEAMAEAGVKVFVVHARSA---LIPPLRHDWVHRLKGDPQLTFVTNGGIRSLEEALFHLKR--VDGVMLGRAVYEDPFVLEEADRRVFGLP--RRPSRLEVARRMRAYLEEEVLKGT---PPWAVLRHMLNLFRGRPKGRLWRRLLSEGRSLQALDRALRLMEEEVG
5	HHPRED-l	1vhn_A	0.329	0.928	4.887	threading_5	---------VKVGLAP-AGYTDSAFRTLAFEWGADFAFSE-VSAKGFL-NSQKTEEL-LPQPHERNVAVQIFGSEPNELSEAARILSE-KYKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEK--NEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK--RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKDFLRSGK-YSEPSREEILRTFERHLELLIKTKGERKAVVE-RKFLAGYTKDLKGARRFREKV-KIEEVQILKE-FYNFIKEV-
6	HHPRED-g	1vhn_A	0.328	0.931	5.451	threading_6	---------VKVGLAP-AGYTDSAFRTLAFEWGADFAFSE-VSAKGFL-NSQKTEELLP-QPHERNVAVQIFGSEPNELSEAARILSE-KYKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKN--EVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK--RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKDFLRSGK-YSEPSREEILRTFERHLELLIKTKGERKAVVE-RKFLAGYTKDLKGARRFREKV-KIEEVQILKE-FYNFIKEVE
7	SP3	3b0pa	0.252	0.941	5.499	threading_7	-------LDPRLSVAPMVDRTDRHFRFLVRQVSLGRLYTEMTVDQAVLRGNRERLL--AFRPEEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETGLAQSVEAMAEAGVKVFVVHARSA-LIPPL--RHDWVHRLKGFPQLTFVTNGGIRSLEEALFHL--KRVDGVMLGRAVYEDPFVLEEADRRVFGLPRRP-----SRLEVARRMRAYLEEEVLKGTPPWAVLRHMLNLFRGRPKGRLWRRLLSEGRSLQALDRALRLMEEEVG
8	SAM-T99	1vhnA	0.331	0.931	7.683	threading_8	VKVG---------LAP-AGYTDSAFRTLAFEWGADFAFSEV--SAKGFLNSQKTEELLPQPHE-RNVAVQIFGSEPNELSEAARILSEKY-KWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEV--EEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEKR--IPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKDFLRSGK-YSEPSREEILRTFERHLELLIKTKGERKAVVE-RKFLAGYTKDLKGARRFREKVKIEEV--QILKEFYNFIKEVE
9	MUSTER	3b0pA	0.262	0.941	3.003	threading_9	-------LDPRLSVAPMVDRTDRHFRFLVRQVSLGVLYTEMTVDQAVLRGNRERLLA--FRPEEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETGLAQSVEAMAEAGVKVFVVHARSA---LIPPLRHDWVHRLKGDFQLTFVTNGGIRSLEEALFHLKR--VDGVMLGRAVYEDPFVLEEADRRVFGLP--RRPSRLEVARRMRAYLEEEVLKGT---PPWAVLRHMLNLFRGRPKGRLWRRLLSEGRSLQALDRALRLMEEEVG
10	SPARKS	1vhna	0.311	0.931	4.650	threading_10	---------VKVGLAPA-GYTDSAFRTLAFEWGADFAFSEVSAKGFL---NSQKTEELLPQPHERNVAVQIFGSEPNELSEAARILSE-KYKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNE--VEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK--RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKDFLRSGKY-SEPSREEILRTFERHLELLIKTKGERKAVV-ERKFLAGYTKDLKGARRFREKVKIEE--VQILKEFYNFIKEVE

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.952 to 1vhnA SCOP code=c.1.4.1	TM-score=0.953 to 1vhnA SCOP code=c.1.4.1	TM-score=0.777 to 1vhnA SCOP code=c.1.4.1	TM-score=0.791 to 1vhnA SCOP code=c.1.4.1	TM-score=0.778 to 1vhnA SCOP code=c.1.4.1