Template-based Modeling Results for EMRK_ECOLI


  Submitted Primary Sequence

>Length 387
MEQINSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSLMAVVPARQMWVNANFKETQLTDVRIGQSVNIISDLYGENVVFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQRVPVEVSLDPKELMEHPLRIGLSMTATIDTKNEDIAEMPELASTVTSMPAYTSKALVIDTSPIEKEISNIISHNGQL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MEQINSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSLMAVVPARQMWVNANFKETQLTDVRIGQSVNIISDLYGENVVFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQRVPVEVSLDPKELMEHPLRIGLSMTATIDTKNEDIAEMPELASTVTSMPAYTSKALVIDTSPIEKEISNIISHNGQL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHECCCCEEEECCEEEEEEEEEEECCCCEEEEEEEEECCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEEECCCCCEECCCCEEEEEEECCCEEEEEEECHHHHCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MEQINSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSLMAVVPARQMWVNANFKETQLTDVRIGQSVNIISDLYGENVVFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQRVPVEVSLDPKELMEHPLRIGLSMTATIDTKNEDIAEMPELASTVTSMPAYTSKALVIDTSPIEKEISNIISHNGQL
554233334423433000000000000000000100012220200220102010020003110101101022222034111001014220110023012201211320231122022111101102111220121121122115322213310220221121022102101310311222123222212210120011022001103202010212010011102202101321000000104201010103121022032122010000011441202010100120122211111222222210210110101010234322332021000010100143332231132121112231110200223222113101200222154
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMEQINSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSLMAVVPARQMWVNANFKETQLTDVRIGQSVNIISDLYGENVVFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQRVPVEVSLDPKELMEHPLRIGLSMTATIDTKNEDIAEMPELASTVTSMPAYTSKALVIDTSPIEKEISNIISHNGQL
1MUSTER3fppB0.1580.6691.627threading_1---------------------------------------RDLQQSVLAKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVID--------------PEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYT------------------RIVAPMAGEVTQITTLQGQTVIAAPNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGD-QLTRYEGQIKDVLPT---------PEKVND-----AIFYYARFEVPNPN---GLLRLDMTAQVHIQLTDVKNVLT---------------------------------------
2SPARKS3fppa0.1610.6743.960threading_2-------------------------------------PGDLQQSVLTGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLME--------------LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKR------------------NQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGD-QLTRYEGQIKDVLPT---------PEKVNDA-----IFYYARFEVPNPN---GLLRLDMTAQVHIQLTDVKNVLT---------------------------------------
3PROSPECT23fppA0.1560.6773.325threading_3PGDLQQ------------------------------------SVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLM--------------ELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQ------------------IKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLG-DQLTRYEGQIKDVLPT---------PEKVNDAI-----FYYARFEVPNPN---GLLRLDMTAQVHIQLTDVK---------------------------------------NVLT
4PPA-I3fppB0.1550.6822.518threading_4----------------------------------RPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVID--------------PEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYT------------------RIVAPMAGEVTQITTLQGQTVIAAQNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGD-QLTRYEGQIKDVLPT---------PEKVND-----AIFYYARFEVPNPN---GLLRLDMTAQVHIQLTDVKNVLT---------------------------------------
5HHPRED-l3fpp_A0.1580.6694.814threading_5--------------------------------------PLQQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQR--------------QQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDA------------------QIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGD-QLTRYEGQIKDVLPTPEKVND--------------AIFYYARFEVPNPN---GLLRLDMTAQVHIQLTDKNVLT----------------------------------------
6HHPRED-g3fpp_A0.1640.6774.178threading_6------------------------------PGDLQQ------SVLATGKLDLRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLME--------------LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASL------------------DTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQL-TRYEGQIKDVLPTPEK----------VNDA----IFYYARFEVPNP---NGLLRLDMTAQVHIQLTDVKNVL-T--------------------------------------
7SP33fppa0.1690.6743.710threading_7-------------------------------------PGDLQQSVLTGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLME--------------LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKR------------------NQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGD-QLTRYEGQIKDVL----------PTPEKVNDAIFY----YARFEVPNPN---GLLRLDMTAQVHIQLTDVKNVLT---------------------------------------
8SAM-T993fppB0.1600.6613.801threading_8RPGDLQQSVLATGKLDALR----------------------------------KVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQR--------------QQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQ------------------IKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQL-TRYEGQIKDVLPT------------------KVNDAIFYYARFEVPNPN-GLLRLDMTAQVHIQLTD---------------------------------------------
9MUSTER3lnnA0.1920.8091.470threading_9LRHEGERLVVPAESPLRRTLAVAPA--------TRETVAAPFNLP--AMIEADLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSAD-------------------------LAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGGTLQAGGGH----------------ILAVRSPINGRVVDLNAATGAYWNDTASLMTVADLSHVFVTANAQEKDLGHVYVGQSATVKFDAY--DDPQPGKVRYVGQ-------ILDAD--TRT-------TKVRMVFDNPD---GRLRPGMFAQATFLSQPHEGIVVPMSA--EVAPWQFEPRVIKLGAQIGDREVDRVVVKEGVL
10SPARKS3lnna0.1850.8092.946threading_10LRHEGERLVVPAESPLRRTLAVAPATRE--------TVAAPFNLP--AMIEADLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSAD-------------------------LAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGGTLQAGGG----------------HILAVRSPINGRVVDLNAATGAYWNDTASLMTVADLSHVFVTANAQEKDLGHVYVGQSATVKFD--AYDDPQPGKVRYVGQILDAD---------TRT-------TKVRMVFDNPD---GRLRPGMFAQATFLSQPHEGIVVPMSA--IVQSGFYTRAFVEVAPWQFEPRVIKLGAQIGDR

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.476 to 1iyuA
SCOP code=b.84.1.1
TM-score=0.496 to 1iyuA
SCOP code=b.84.1.1
TM-score=0.487 to 1iyuA
SCOP code=b.84.1.1
TM-score=0.487 to 1iyuA
SCOP code=b.84.1.1
TM-score=0.482 to 1iyuA
SCOP code=b.84.1.1