Template-based Modeling Results for ERFK_ECOLI


  Submitted Primary Sequence

>Length 310
MRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSFTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKSGSQLTIPQQLILPDTVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPVQISSGSRQMF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSFTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKSGSQLTIPQQLILPDTVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPVQISSGSRQMF
CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEEECCEECCCCCCCCEEEEECCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCHHHEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSFTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKSGSQLTIPQQLILPDTVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPVQISSGSRQMF
4411010000000000210100102123332422221110202333231031001211101110131122232111322220100221223322320000112321000022321000000000132223123220000212221121211231121013213212211211231110000010010000000112221113102000202120022003103210201002220201123301000100211343323232333121212310211132331213202100243221001010224434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSFTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKSGSQLTIPQQLILPDTVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPVQISSGSRQMF
1MUSTER1y7mA0.3440.5161.390threading_1-------------------------------------LTYQVKQGD--TLNSIAADFRISTAALLQANPSLQAGLT-AGQSIVIPG-LPDPYTIPYHIAVSIGAKTLTLSL--NNRVKTYPIAVGKILTQTPTG-EFYIINRQRNP---------------------------GGPFGAYWLSLSAHYGIHGTNNPASIGKAVSKGCIRH-NKDVIELASIVPNGTRVTINR------------------------------------------------------------------------------
2PROSPECT21sezA10.0730.9681.589threading_2AKRVAVIVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGESEGDVTFLIDSLGL-REKQQFPLSQNKRYIARNGTPVLLPSKTSANKKRQRGSFSFLGGQTLTLRLNSRVLELSCS----CTEDSAIDSWSIISASPHKRQSEEESFDAVITAPLCDVKSKIAKRGNPFLLNFIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQH-----GLKTLGTLFSSFPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEGEPNYDSVLDAIDKEKNLPGLFYAGNESVS
3SPARKS1y7ma0.3380.5163.265threading_3-------------------------------------LTYQVKQGD--TLNSIAADFRISTAALLQANPSLQAGLT-AGQSIVIPG-LPDPYTIPYHIAVSIGAKTLTLSLNN--RVKTYPIAVGKILTQTPTG-EFYIINRQRNP---------------------------GGPFGAYWLSLSAHYGIHGTNNPASIGKAVSKGCIRH-NKDVIELASIVPNGTRVTINR------------------------------------------------------------------------------
4PROSPECT21zatA0.1990.6652.181threading_4KEQLASMNAIANVKATYSINGETFQIPTSTNDTSTKRGEVTVPVGTYSWTIQTDSETEALKKAILAGQD------FTRSPIVQGGTTADHPLIEDTYIEVDLENQHMWYYK-DGKVALETDIVSGKPTTPTP-AGVFYVWNKEEDATLKGTN-----------------GTPYESPVNYWMPIDWTGVGIHDSDWQPEYGGDGSHGCINTPPSVMKELFGMVEKGTPVLV-------------------------------------------------------------------------------F
5PPA-I1y7mA0.3380.5161.873threading_5-------------------------------------LTYQVKQGD--TLNSIAADFRISTAALLQANPSLQAGLT-AGQSIVIPG-LPDPYTIPYHIAVSIGAKTLTLSLNN--RVKTYPIAVGKILTQTPTG-EFYIINRQRNPGG---------------------------PFGAYWLSLSAHYGIHGTNNPASIGKAVSKGCIRH-NKDVIELASIVPNGTRVTINR------------------------------------------------------------------------------
6HHPRED-l1y7m_A0.3310.5168.163threading_6-------------------------------------LTYQVKQGDT--LNSIAADFRISTAALLQANPSLQAG-LTAGQSIVIPGLP-DPYTIPYHIAVSIGAKTLTLS-LNNRV-KTYPIAVGKILTQTPTGEFYIINR-QR---------------------------NPGGPFGAYWLSLSAHYGIHGTNNPASIGKAVSKGCIR-HNKDVIELASIVPNGTRVTINR------------------------------------------------------------------------------
7HHPRED-g1y7m_A0.3380.5167.026threading_7-------------------------------------LTYQVKQGDT--LNSIAADFRISTAALLQANPSLQAGLT-AGQSIVIPG-LPDPYTIPYHIAVSIGAKTLTLSLNN-RV-KTYPIAVGKILTQTP-TGEFYIINRQRN---------------------------PGGPFGAYWLSLSAHYGIHGTNNPASIGKAVSKGCIR-HNKDVIELASIVPNGTRVTINR------------------------------------------------------------------------------
8SP31y7ma0.3440.5163.190threading_8-------------------------------------LTYQVKQGD--TLNSIAADFRISTAALLQANPSLQAGLT-AGQSIVIPG-LPDPYTIPYHIAVSIGAKTLTLSL--NNRVKTYPIAVGKILTQTPTGEFY-IINRQRNP---------------------------GGPFGAYWLSLSAHYGIHGTNNPASIGKAVSKGCIRH-NKDVIELASIVPNGTRVTINR------------------------------------------------------------------------------
9SAM-T991y7mA0.3290.5105.404threading_9-------------------------------------LTYQVKQGD--TLNSIAADFRISTAALLQANPSLQAGLTAGQSIVIPGLPD--PYTIPYHIAVSIGAKTLTL--SLNNRVKTYPIAVGKILTQTPT-GEFYIINRQRNPGG---------------------------PFGAYWLSLSAHYGIHGTNNPASIGKAVSKGCIR-HNKDVIELASIVPNGTRVTI--------------------------------------------------------------------------------
10MUSTER1zatA0.2180.6520.935threading_10IPSSDIMSWTEQVRQYVTDLGTKYNTSTNDTKFSTKRGEVTVPVGTYSQTDSETEAL---KKAILAGQDFTRSPIVQGGTT------ADHPLIEDTYIEVDLENQHMWYYK-DGKVALETDIVSGKPTTPTPAG-VFYVWNKEEDATLKGTNG-----------------TPYESPVN-YWMPIDTGVGIHDSDWQPEYGGRGSHGCINTPPSVMKELFGMVEKGTPVLVF-------------------------------------------------------------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.738 to 1y7mA
SCOP code=b.160.1.1
TM-score=0.546 to 1d5tA
SCOP code=c.3.1.3
TM-score=0.741 to 1y7mA
SCOP code=b.160.1.1
TM-score=0.742 to 1y7mA
SCOP code=b.160.1.1
TM-score=0.665 to 1zatA
SCOP code=b.160.1.1