Template-based Modeling Results for ALF1_ECOLI


  Submitted Primary Sequence

>Length 350
MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMGAVAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKMAENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILGRKAFKKSMADGVKLINAVQDVYLDSKITIA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMGAVAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKMAENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILGRKAFKKSMADGVKLINAVQDVYLDSKITIA
CCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEECCCCCHHHHHHHHHHHHEECCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMGAVAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKMAENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILGRKAFKKSMADGVKLINAVQDVYLDSKITIA
43300210031022003130230223202111321011000213223200210110122131122110000001210310102112211211003100200030101000001000110043223310000101233211232223210001022003000100000001113313200210010021024010000000112232143322223110200000010003000000102003222002112212233422231123112300210010011020000011122222220020022001023020100000120123212200200200130002242325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMGAVAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKMAENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILGRKAFKKSMADGVKLINAVQDVYLDSKITIA
1MUSTER1ok6A0.2700.7202.015threading_1----------------------------------------------ANLTEKFLRIFA-----RRGKSIILAYDHGIEHGPAD-FMDNPDSADPEYILRLARDAGFDGVVFQRGIAEKY---YDGSVPLILKLNGKTTL-YNGEPVSVANCSVEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVWSYPRGGKVVN-----ETAPEIVAYAARIALELGADAMKIKYTGDPKTFSWAVKVAG---------------------------KVPVLMSGGPKKTEEDFLKQVEGVLEA----ALGIAVGRNVWQR--RDALKFARALAELVYGGK----
2SPARKS2qjga0.2190.7575.239threading_2-------------------------------------MELFKDIKNLGKLVRLERIFNR----ESEKTVIVPMDHGVSNGPIKGLI------DIRKTVNDVAEGGANAVLLHKGIVRHGHRGYGKDVGLIIHLSGGTAIS-PNPLKKVIVTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNER-----DPELVAHAARLGAELGADIVKTSYTGDIDSFRDVVKG---------------------------CPAPVVVAGGPKTNTDEEFLQMIKDAME---AGAAGVAVGRNIFQHDD--VVGITRAVCKIVHENADVEE
3PROSPECT22qjgA0.2190.7573.332threading_3ME-------------------------------------LFKDIKNLGKLVRLERIFNR----ESEKTVIVPMDHGVSNGPIKGLI------DIRKTVNDVAEGGANAVLLHKGIVRHGHRGYGKDVGLIIHLSGGTAIS-PNPLKKVIVTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNER-----DPELVAHAARLGAELGADIVKTSYTGDIDSFRDV---------------------------VKGCPAPVVVAGGPKTNTDEEFLQMIKDAM---EAGAAGVAVGRNIFQHDDVVG--ITRAVCKIVHENAEIRK
4PPA-I1ok6A0.2680.7263.335threading_4----------------------------------------------ANLTEKFLRIFA-----RRGKSIILAYDHGIEHGPAD-FMDNPDSADPEYILRLARDAGFDGVVFQRGIAEKY---YDGSVPLILKLNGKTTLY-NGEPVSVANCSVEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVWSYPRGGKVVNE-----TAPEIVAYAARIALELGADAMKIKYTGD---------------------------PKTFSWAVKVAGKVPVLMSGGPKTK--TEEDFLKQVEGVLEAGALGIAVGRNVWQRRD--ALKFARALAELVYGGK----
5HHPRED-l1w8s_A0.2650.7116.089threading_5-----------------------------------------------NLTEKFLRIFAR-----RGKSIILAYDHGIEHGPA-DFMDNPDSADPEYILRLARDAGFDGVVFQRGIAEKYY---DGSVPLILKLNGKTTLY-NGEPVSVANCSVEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVN-----ETAPEIVAYAARIALELGADAMKIKYTGDPKTFSWA-------------------------VK--VAGKVPVLMSGGPKTTEEDFLKQVEGVL---EAGALGIAVGRNVWQRR--DALKFARALAELVY-------
6HHPRED-g1w8s_A0.2600.7145.262threading_6-----------------------------------------------NLTEKFLRIFAR-----RGKSIILAYDHGIEHGPAD-FMDNPDSADPEYILRLARDAGFDGVVFQRGIAEKY---YDGSVPLILKLNGKTTLY-NGEPVSVANCSVEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNE-----TAPEIVAYAARIALELGADAMKIKYTGDPKTFSWAVKV--------------------------AGKVPVLMSGGPKTKTEEDFLKQVEGVL---EAGALGIAVGRNVWQRRDAL--KFARALAELVY-------
7SP32qjga0.2230.7575.594threading_7------------------------------------MELFKDI-KNLGKLVRLERIFNR----ESEKTVIVPMDHGVSNGPIKGLI------DIRKTVNDVAEGGANAVLLHKGIVRHGHRGYGKDVGLIIHLSGGTAI-SPNPLKKVIVTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHI-----QNERDPELVAHAARLGAELGADIVKTSYTGDIDSFRDVVKG---------------------------CPAPVVVAGGPKTNTDEEFLQMIKDAME---AGAAGVAVGRNIFQHDD--VVGITRAVCKIVHENADVEA
8SAM-T992qjgA0.2300.7318.014threading_8-------------------------------------------------NLGKLVRLERIFNRESEKTVIVPMDHGVSNGPIKGLI------DIRKTVNDVAEGGANAVLLHKGIVRHGHRGYGKDVGLIIHLSGGTAIS-PNPLKKVIVTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQN-----ERDPELVAHAARLGAELGADIVKTSYTGDIDSFRDVVKG----------------------------CPAPVVVAGGPKTTDEEFLQMIKDA---MEAGAAGVAVGRNIFQH--DDVVGITRAVCKIVHENADVEE
9MUSTER2qjgA0.2230.7541.997threading_9------------------------------------MELFKDIK-NLGKLVRLERIFNR----ESEKTVIVPMDHGVSNGPIKGLI------DIRKTVNDVAEGGANAVLLHKGIVRHGHRGYGKDVGLIIHLSGGTAIS-PNPLKKVIVTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNER-----DPELVAHAARLGAELGADIVKTSYTGDIDSFRDVVKGC---------------------------PAPVVVAGGPKTNTDEEFLQMIKDAMEA----AAGVAVGRNIFQH--DDVVGITRAVCKIVHENADVEA
10SPARKS3gkfo0.2070.7604.784threading_10-----------------------GKDRTDQPQKNIPFTLKGCGALDWGMQSRLSRIFNP----KTGKTVMLAFDHGYFQGPTTGLERIDINI------APLFE-HADVLMCTRGILRSVVPPATN-RPVVLRASGANSI-LAELSNEAVALSMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVRD-------------QRYFSLATRIAAEMGAQIIKTYYVEK--GFERIVAG----------------------------CPVPIVIAGGKKLPEREALEMCWQAID---QGASGVDMGRNIFQSDH--PVAMMKAVQAVVHHNETADR

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.854 to 1ok6A
SCOP code=c.1.10.1
TM-score=0.854 to 1ok6A
SCOP code=c.1.10.1
TM-score=0.795 to 1ok6A
SCOP code=c.1.10.1
TM-score=0.791 to 1ok6A
SCOP code=c.1.10.1
TM-score=0.855 to 1ok6A
SCOP code=c.1.10.1