Template-based Modeling Results for GATD_ECOLI

Submitted Primary Sequence

>Length 346
MKSVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKSVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP
CEEEEEECCCCEEEEEECCCCCCCCCEEEEEEEEEEECHHHHHHHCCCCCCCCCEECCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCHHHHCCCHHHCCCCCEEEECCCCCCEEEEEEEHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHEEEEEEHHHHHHHHHHHHHCCCCEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKSVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP
2100002242203012022141444210101000000000000301420022000001110001001003313313201000010101012011023112100330100001311100100001140002013302111000010000001002213023222000000000000001002112011000000133101003301011001133220220012134432110001001013002100200132010000000333131221200200321020100101211222131021002002333020320000101031013002202532220100113
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKSVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP
1	MUSTER	2ejvA	0.280	0.971	3.307	threading_1	MRALAKLAPEGLTLVDRPVPEP-GPGEILVRVEAASICGTDLHIWKWDARIRPPLVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVT-GSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFD--LAGELVMRGITAFGIAGR----RLWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLAS-GQAVKVILDP
2	SPARKS	3m6ia	0.247	0.971	3.919	threading_2	NIGVFTNPQHDLWISSVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPPGLLRRYVNHPAVWCHKIG-NMSYENGAMLEPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVEEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQI---PFMRASVREVDLQFQYRY------CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPTGAIKVQIQS
3	PROSPECT2	3m6iA	0.250	0.971	4.894	threading_3	NIGVFTNPQHDLWISEASPGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPVPGLLRRYVNHPAVWCHKIGN-MSYENGAMLEPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQI---PFMRASVREVDLQFQYRYC------NTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASPKTGAIKVQIQS
4	PPA-I	2ejvA	0.280	0.971	3.621	threading_4	MRALAKLAPEGLTLVDRPVPEP-GPGEILVRVEAASICGTDLHIWKWDARIRPPLVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVT-GSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDL--AGELVMRGITAFGIAGR----RLWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLAS-GQAVKVILDP
5	HHPRED-l	2d8a_A	0.292	0.919	2.279	threading_5	-VAI-KTKPGYAELVEVDVPK-PGPGEVLIKVLATSICGTDLHIYEWNEWIKPPQI-GHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCY------------TKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTVL-AGPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEV-DITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTI--DFNNLIIFKALTIYGITGRH----LWETWYTVSRLLQSGKLNLDPIITHKYKFDKYEEAFEL-RAGKT-GKVVF--
6	HHPRED-g	1pl8_A	0.272	0.968	1.921	threading_6	NLSLVVHGPGDLRLENYPIPE-PGPNEVLLRMHSVGICGSDVHYWEYGRIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTV---PLLHAAIREVDIKGVFRYC------NTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFET-FKKGLGLKIMLKC
7	SP3	3m6ia	0.250	0.971	4.292	threading_7	TIGVFTNPQHDLWISEASPGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPPGLLRRYVNHPAVWCHKIG-NMSYENGAMLEPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVEEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQI---PFMRASVREVDLQFQYRYC------NTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASPKTGAIKVQIQS
8	SAM-T99	1e3jA	0.276	0.954	3.157	threading_8	--SAVLYKQNDLRLEQRPIPEP-KEDEVLLQMAYVGICGSDVHYYEHGFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCAPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGATLVVDPAKSSIIERIRSAIGD-LPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTV---PLVNACAREIDIKSVFRYC------NDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADTIKVMI--
9	MUSTER	1e3jA	0.269	0.968	3.232	threading_9	NLSAVLYKQNDLRLEQRPIPEP-KEDEVLLQMAYVGICGSDVHYYEHGRIADFPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADLVVDPAKEEESSIIERIRSGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTV---PLVNACAREIDIKSVFRYC------NDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKADNTIKVMISC
10	SPARKS	1e3ja	0.272	0.968	3.506	threading_10	NLSAVLYKQNDLRLEQRPIPEP-KEDEVLLQMAYVGICGSDVHYYEHGRIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLDPAKEEESSIIERIRSGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTV---PLVNACAREIDIKSVFRYCN------DYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKDNTIKVMISC

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.911 to 1e3jA SCOP code=b.35.1.2	TM-score=0.909 to 1e3jA SCOP code=b.35.1.2	TM-score=0.892 to 1pl7A SCOP code=b.35.1.2	TM-score=0.907 to 1pl7A SCOP code=b.35.1.2	TM-score=0.913 to 1e3jA SCOP code=b.35.1.2