Template-based Modeling Results for SYGB_ECOLI


  Submitted Primary Sequence

>Length 689
MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTDKGEWLLYRAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRPVHTVTLLLGDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYANDGKLLPNFIFVANIESKDPQQIISGNEKVVRPRLADAEFFFNTDRKKRLEDNLPRLQTVLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHFRTLDAAAALAAANKRVSNILAKSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADISLLQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTDKGEWLLYRAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRPVHTVTLLLGDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYANDGKLLPNFIFVANIESKDPQQIISGNEKVVRPRLADAEFFFNTDRKKRLEDNLPRLQTVLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHFRTLDAAAALAAANKRVSNILAKSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADISLLQ
CCCCCEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCCCCCEEEEECCCHHHHCCCCCCCCHHHHHHHHHCCCCHHHHEEEEECCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCEEEEEECCEECCCEECCCCCCCCCCEEECCHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHCCCCCEEEEECCCHHHHCCCHHHHHHHHHHHCEEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTDKGEWLLYRAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRPVHTVTLLLGDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYANDGKLLPNFIFVANIESKDPQQIISGNEKVVRPRLADAEFFFNTDRKKRLEDNLPRLQTVLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHFRTLDAAAALAAANKRVSNILAKSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADISLLQ
54432000200133012300320031002101210231202222010000010000002402423332212221111210112313113001000320212232021122241100002022323203200120021003403013112111120200000100010023200101011021321021121103120202102100300342020001132012102210220045120202223200210010031000000202330020122001200321221000126413001100000123142131012102300221010011102212333033003202201113301213210210110001004202120210110010010100120022023000100110033222232001001310112222331222110000000110010000000122141340111001000000100032303020220022003112331212200210021011001210342202120020001232220010111020012132232012001002100200242332223412221132231120121022013202311331303200210030130012002301011313301210020022012001200112213
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTDKGEWLLYRAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRPVHTVTLLLGDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYANDGKLLPNFIFVANIESKDPQQIISGNEKVVRPRLADAEFFFNTDRKKRLEDNLPRLQTVLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHFRTLDAAAALAAANKRVSNILAKSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADISLLQ
1SPARKS1f7ua0.1370.8031.757threading_1ASTANMISQLKKLSIAEPAVAKIVDLMRNYISQELSK--------------------ISGVDSSLIFPALEW--TNIPRLRIKGANPKDLAVQWAEKFPCG-DFLEKVEANGP-FIQFFF-----NPQFLAKLVIPDILTRKE-----DYGSCK------------LVENKKVIIEFSSPNAKPFHAGHEKLGWEVIRMNQFGLLAVGFERYGNLVKDPIHHLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFK----RMEDGDEEALKIWKRFREFSIEKYID---TYARLN--------IKYDVYSGESQVSKESMLKAIDLFKEKGLTHEDKGAVDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKY---------------HFDKMIYVIA-------------SQQDLHAAQFFEILKQ------MGFEWAKDLQHVNFGMVQGMST--------------------------------RKGTVVFLDNILEETKEKMHEVMKKNENKYAQIEH----PEEVADLVGI-SAVMIQDMQGKRINNYEFWERMLS----FEGDTGPYLQYAHSRLRSVERNASGITQEKADFSLLKEPAAKLLIRLLGQYPDVLRNAIKTHEPTTVVTYLFKLTHQVSSCYDVLWVAGQTEELATARLALYGAARQVLYNGMRLTPVE
2PROSPECT21qgra0.0770.9592.158threading_2MELITILEKTVSPD--RLELEAAQKFLERAAVENLPTF---------------LVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARRELHTLGTE------TYRPSSASQCVAGIACAEIPVNQWPELIPTNPNSTEHMKEIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERRVAALQNLVKIMSLYYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYANDDDDDWNPCKAAGVCLMLLATCCEDDIPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINFSSLAEAAYEAADVADELIVQKLLETTDRPDGHQNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFSGGMAVSTLVEVLGGEFLKYMEANYAEYQVCLAAVGGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKSDYDMV--DYLNELRESCLEAYTGIVQGLKGDQVMLVQPRVEFILSFIDHIAGDE---DHTDGVVACAAGLIGDLCDVLKLVEARPMIA
3HHPRED-l1f7u_A0.1490.7491.879threading_3-ASTSQLKKLSIAEPASHPDVNIVDLMRNYISQELSKIGVDSSALEWTNTMER------------GDLLIPI--PRLRI---KGANPKDLAVQWAEKFPCG-DFLEKVEANGP-FIQFFFN--PQFLKLVIPDILTR---KEDY------GSCKL------------VENKKVIIEF---SSPNIA--------KPFHAGH-------------------LRSTIIGGFLANLYEKLGWEVIRMNGLLA--VGFERYGN------EEALVKDPIHHLFDVVRINKDI----EEEGDSI----------PLEQSGKAREYFKRMEDGDEEALKIWKRFREFSIEKYIDTYANIKYDVYGESVKESMLKAID---LFKE-KGLDYLTRDVGAAMYHFDKMIYVIASAAQFFEIL-----KQMGFEWA------KDLQH----------------------------VNFGMVQ-GMS----------------TRKGTVVFLDNILEETKEK-------------MHEVMKKNENKYA-QIEHPEEVADLVMQGKRINNYEFK--WERMLSF-EGDTGPYLQYAHSRLRSVERNASGITWINADFSLLKEPAAKLLIRLLGQYPDVLRNAIKTHEPTTVVTYLFKLTHQVSSCYDVLWVAGQTEELATARLALYGAARQVLYNGMRLLGL-
4HHPRED-g2o08_A0.1550.2341.422threading_4----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NRGKALQLVKPHLTE----HRYQHTIGV-ETAIDLAKLYGADQQKAELAAIFHDYAKFDILFYGDELLHAPCGAYYVREVGIDEDVLQAIRFHTT----G-RPN-SLLEKIIFLADYIEPNR--------------QF----PGVEKVRTQAKTDLNGAIISSLVNTITFLLKQPIYPDTL---------ATYNQLLEQ------------------------------------------------------------------------------------------------------------------------------------------------------
5SPARKS2zuea0.1440.8261.412threading_5-------------------LMEIRESVKERIEEIIKEIAPQWEG------------EIELKETPDPKLGDFGTPIAFKLAKLLKRPPIEIAEKIVEKKLNLPEGIKDVKAVNG-YINVFI-----DYPHFARILINDILAKGDFGSSEIGKGKKVIVEDVMARILRFLGYEVEVQNYIGIQFAQVYWGYLRLKEE------FERIMNELRERGLKDNPIDHALGLLYVEVNRRLED-------NPELENEIRDIMKK----LESGELYGRKLAEEVVRAQMVTTYKL-------GVKYDLLVW-------ESDIVRRKLFEIALELLSKNENFYIPSDGKYRGAFVMDLRKLVLRRSDGTA---TYTGKDIAYHLWKFGKIDVDL---------------LYKE-----------------WDSTTWT-----TAPDGKSMPNKFGNANIVINVAEQKHPQLAIKYALQL-LG-FEDAAANLYHLAYEHVERPEGVGFTVDEVIQEAVKRARELIEEKNP-----ALSDEEKAEVAEKVGI-GAIRYNLIKYSPDKKIIFR--WEDVLNF-EGESAPYIQYAHARCSSILRKAEEEGIKNADFTKL-SERERELVIMLSKFPRIVEQAGKDVKPHLIAWFANELASLFNKFYMDHPVLKAEEGVREARLLLVMAVEQVLKNALYLMGIE
6PROSPECT22bkuB0.0740.9222.063threading_6MSTAEFALENSILSPDQNIRLTSETQLKKLSNDNFLQDENTKLEGRILA-----ALTLKNELVSKDSVKTQQFAQRWITQVSPEVSIEPRADIELPHGAWPMKIMVDNTGAE----------QPENVKRASLLALGYMCE--------SADALVSSSNNILIAIVQGAQST---------------------ETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEATQ------AEDIEVQAAAFGCLCKIMSKYYTFMKPYMSPNDKVASMTVEELAQFPQSPLQSYNFALSSILLTRQNEDPSMSAGACLQLFAQNCGNHIEFVEQNITADNWRNREAAVMAFGSIMDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVAESIDPLPGVVQACLIGLQDHPKVATNCSWEQLAEATPSPNRIDNEFNARASAFSALDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLAPSSVEPVADMLMGLFFRLLEKKDSAFKGFEKYLETFSPYLLKALNQVDSPVGFIADISNSLEEDFRRYSDAMNVLAQMISNPNGADFIPYLNDIMALCVAAQNTKPENGTLEAL--DYQIKVLEAVLDAYVGIVAGL-HDKPEALFPYVGTIFQFIAQVAEDPQLY-SEDATSRAAVGLIGDIAAMIKQFYGQDWVI
7HHPRED-l2zue_A0.1450.7401.757threading_7-------------------LMEIRESVKERIEEIIKEIAPQ--W-----EG-EIELKET-PDPKLGDFG----TPAFKLAKLLKRPPIEIAEKIVEKLKLNPEGIKDVKAVN-GYINVFI--DYPFARILINDILAKG---DRFGSSE-IGKGIVEHTSVARRILRFLGYEVEVQNYIDIQFAQVYWGYLRLKEE-FERNPIDHALG-----------------LLYVEVNRRLEDNP---EL-ENEIRDIMKKLES-----G--E----LYGRKLAEEVVRAQMVTTYKLGVK---YDLLVW-------ESDIVRRKLFEIALELLSKNENFYKYRGAFVLRKLFPDNPILVLRRSDGTATY--------------------T--------------------------------------GKDIAYHLWKLYKPNKFGNIVQKHPQLAIKYALQLLGFELYHLAYEHVE-RP-----------E-GKFSGRKGVGFTVDEVIQEAV---------------------KRARELIEEKNVGIGAIRYLIKYSPDKKIIFR--WEDVLNFEG-ESAPYIQYAHARCSSILRKAEEEGIKNADF-TKLSERERELVIMLSKFPRIVEQAGKDVKPHLIAWFANELASLFNKFYMDHPVLKAEEGVREARLLLVMAVEQVLKNALYLMGI-
8HHPRED-g2ogi_A0.1530.2471.372threading_8----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YKDYT-GLD----RTELLSKVRH--S----DKRFNHVLGVERAAIELAERYGYDKEKAGLAALLHDYAKEDEFLKKNNIWHGLVGIYKIQELAIDQDILAAIAKHTV----G-SAQ-STLDKIVYVADYIEHNRD--------------F----PGVEEARELAKVDLNKAVAYETARTVAFLASAQPIYPKTIETYNAYIP-----YLD-------------------------------------------------------------------------------------------------------------------------------------------------------
9SPARKS1iq0a0.1680.7271.326threading_9---------------------MLRRALEEAIAQALKEMGVP------------------------VRLKVAR--APK----DKPGDYGVPLFALAKELRKP-----------------------------PQAIAQELKDRLPLP------------------------EFVEEAVPVG---------------GYLNFRRTEALLREALRPKVVLVEHHLRNIALGDAIARILAYAGREVLV-------LNYIDDT-------------GRQAAETLFALRHYG-----LTWDGK-------------EKYDHFAGRAYVRLH---QDPEY---ERLQPAIEEVLHALER-------GELREEVNRILLAQMATMHALNARYDLLVWESDIVRAGLLQKALALLEQS----PHVFRPREGKYKDIAFQFWRFRPYENPYYPGLRTSAPEGEAYTPKAEETINVVDVRQ-----SHPQALVRAALALAGYPALAE---KAHHLAYETVLLEGRQMSGAVSVDEVLEEATRRARAIVEEKNPDEEAARMVALTEPKKQIDFR--YQEALSF-EGDTGPYVQYAHARAHSILRKAGEWGAPDLS---QATPYERALALDLLDFEEAVLEAAEERTPHVLAQYLLDLAASWNAYYNAREVLTAPEGLRELRLSLVQSLQRTLATGLDIPAPE
10PROSPECT21b3ua0.0990.7811.964threading_10AAADGVLIDELRNEDVQLRLNSILSTIALALGVERTRSEL------------------------------------LPFLTDTIYDEDEVLLALAEQLGTFTTLV--------------------GGPEYVHCLLPPLESLA--------TVEETVVRDKAVESLRAISHE---------------------HSPSDLEAHFVPLVKRLAGG-----DWFTSRTSACGLFSVCYP------RVSSAVKAELRQYF-----------RNLCSDDTPMVRRAAASKL--------------------------GEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEA-----CVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITK-TDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELV----------SDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLIRQLSQSLLPAIVELAEDAKVRLAIIEYMLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLKYFAQEA--LTVLS

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.470 to 1hurA
SCOP code=c.37.1.8
TM-score=0.743 to 1f7uA
SCOP code=a.27.1.1
TM-score=0.716 to 1qgkA
SCOP code=a.118.1.1
TM-score=0.708 to 1f7uA
SCOP code=a.27.1.1
TM-score=0.393 to 2pq7A
SCOP code=a.211.1.1