Template-based Modeling Results for HCAB_ECOLI


  Submitted Primary Sequence

>Length 270
MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQFFPQPADFTGPYVMLTSRRNNRALSGVMINADAGLAIRGIRHVAAGLDL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQFFPQPADFTGPYVMLTSRRNNRALSGVMINADAGLAIRGIRHVAAGLDL
CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCEEEECCCEEECCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQFFPQPADFTGPYVMLTSRRNNRALSGVMINADAGLAIRGIRHVAAGLDL
452232100000000100010001101421010000102221012004411320000101011221022002200340030000000000123211123112302220022001000100000010002101423000000000011221110000000110010001200120033010000000002031202212232322212220021012101131112011000000000022223001010000110000101222221244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQFFPQPADFTGPYVMLTSRRNNRALSGVMINADAGLAIRGIRHVAAGLDL
1MUSTER1bdbA0.4770.9632.343threading_1M-KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRG---------PSSLGPLADMLKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGVRGFFSGAGGNDL
2SPARKS1bdb_0.4850.9631.978threading_2-MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLG---------PLADMLKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGVRGFFSGAGGNDL
3PROSPECT21bdb_0.4880.9633.640threading_3M-KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGP---------LADMLKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGVRGFFSGAGGNDL
4PPA-I1bdbA0.4850.9631.925threading_4-MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLG---------PLADMLKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGVRGFFSGAGGNDL
5HHPRED-l3ak4_A0.2570.9371.541threading_5IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMR-----PAVDITDEEWDFNFDVNARGVFLANQIACRHFLASKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPNIRVNCVCPGFVKTAMQEREIIWEAELRMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAAR-FMTGQGINVTGGVRMD-----------
6HHPRED-g3ak4_A0.2570.9371.326threading_6IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRP-----AVDITDEEWDFNFDVNARGVFLANQIACRHFLASTGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAKNIRVNCVCPGFVKTAMQEREIIWEAERGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAA-RFMTGQGINVTGGVRMD-----------
7SP31bdb_0.4880.9631.950threading_7M-KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLG---------PLADMLKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGVRGFFSGAGGNDL
8SAM-T992uvdA0.2290.8891.322threading_8--MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNQKANEVVDEIGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDN-----LLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASNITVNAIAPGFIATDMTDVL----------DENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQ-SKYITGQTLNVDGGMVM------------
9MUSTER1ydeF0.2600.9412.225threading_9T-RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-GAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPP----QRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPGVRVNCISPGNIWTPLWEELAALMPDPRAS----IREGMLAQPLGRMGQPAEVGAAAVFLASE--ANFCTGIELLVTGGAELGYGCKASR----
10SPARKS3ak4a0.2530.9371.965threading_10IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVD-----ITDEEWDFNFDVNARGVFLANQIACRHFLASNGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPNIRVNCVCPGFVKTAMQEREIIWEELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAAR-FMTGQGINVTGGVRMD-----------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.913 to 1bdbA
SCOP code=c.2.1.2
TM-score=0.927 to 1bdbA
SCOP code=c.2.1.2
TM-score=0.964 to 1bdbA
SCOP code=c.2.1.2
TM-score=0.949 to 1bdbA
SCOP code=c.2.1.2
TM-score=0.964 to 1bdbA
SCOP code=c.2.1.2