Template-based Modeling Results for HDFR_ECOLI


  Submitted Primary Sequence

>Length 279
MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGVNLFTRHRNNIRLTAAGEKLLPYAETLMSTWQAARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQDAHTGLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSQLLGYFTLALYTSAPSKLKGDLNYLRLEWGPDFQQHEAGLIGADEVPILTTSSAELAQQQIAMLNGCTWLPVSWARKKGGLHTVVDSTTLSRPLYAIWLQNSDKNALIRDLLKINVLDEVY
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGVNLFTRHRNNIRLTAAGEKLLPYAETLMSTWQAARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQDAHTGLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSQLLGYFTLALYTSAPSKLKGDLNYLRLEWGPDFQQHEAGLIGADEVPILTTSSAELAQQQIAMLNGCTWLPVSWARKKGGLHTVVDSTTLSRPLYAIWLQNSDKNALIRDLLKINVLDEVY
CCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCEEEEEHHHHHHCCCEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGVNLFTRHRNNIRLTAAGEKLLPYAETLMSTWQAARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQDAHTGLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSQLLGYFTLALYTSAPSKLKGDLNYLRLEWGPDFQQHEAGLIGADEVPILTTSSAELAQQQIAMLNGCTWLPVSWARKKGGLHTVVDSTTLSRPLYAIWLQNSDKNALIRDLLKINVLDEVY
441310200110042210020031021110211110230042121100212212020021012002102300210220132123223212000000110020000300010121133011010102212231003102333000000011242440200100213000001220312231100103200100100020022332100101203000200132100000000003432100102322202110000002323222003200202112313
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGVNLFTRHRNNIRLTAAGEKLLPYAETLMSTWQAARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQDAHTGLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSQLLGYFTLALYTSAPSKLKGDLNYLRLEWGPDFQQHEAGLIGADEVPILTTSSAELAQQQIAMLNGCTWLPVSWARKKGGLHTVVDSTTLSRPLYAIWLQNSDKNALIRDLLKINVLDEVY
1MUSTER1iz1B0.1720.9782.807threading_1MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRARGDVGELSVAYFGTPIYRSLPLLLRAFLTST---PTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKRAVELTLFPRGGRFADEVIGLFGIEPRIARVVEDATAALALTMAGAASSIVPASVAAWPDIAFARIVGTRVKVPISCIFRKE-KQPPILARFVEHVRR--SA
2SPARKS1iz1a0.1720.9785.022threading_2MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRARGDVGELSVAYFGTPIYRSLPLLLRAFLT---STPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKRAVELTLFPRGGSFADEVIGLFGIEPRIARVVEDATAALALTMAGAASSIVPASVAAWPDIAFARIVGTRVKVPISCIFRKEK-QPPILARFVEHVRRSA--
3PROSPECT21iz1a0.1720.9784.184threading_3MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRARGDVGELSVAYFGTPIYRSLPLLLRAFLT---STPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFAVELTLFGGRPSFADEVIGLFGIEPRIARVVEDATAALALTMAGAASSIVPASVAARWPDIAFARVGTRVKVPISCIFRKEKQP-PILARFVEHV--RRSA
4PPA-I1iz1B0.1710.9864.431threading_4MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRARGDVGELSVAYFGTPIYRSLPLLLRAFLTST---PTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKRAVELTLFGGRPSFADEVIGLFGIEPRIARVVEDATAALALTMAGAASSIVPASVAAWPDIAFARIVGTRVKVPISCIFRKE-KQPPILARFVEHVRRSAKD
5HHPRED-l1ixc_A0.1630.9433.398threading_5-EFRQLKYFIAVAEAGN-AAAAKRLHVSQPPITRQ-QALEADLGVVLLE-----IELTAAGHAFLEDARRILELAGRSGDRSRARGDVGELSVAYFGTPIYRSLPLLLRAF---LTSTPTATVSLTH-TKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFGVELTLFPRRPSFADELFKHAGIEPRIARVVEDATAALALT-AGAASSIVPASVAAIRPDIAFARVGTRVKVPISCIFRKEK-QPPILARFVEHVR-RSA-
6HHPRED-g1al3_A0.0730.6883.005threading_6------------------------------------------------------------------------------------WPDKGSLYVATTHTQARYALPGVIKGF---IERYPRVSLHMHQGSPTQIAEAVSKGNADFAIATEALLYDDLVMLPCYHWNRSIVVTPEHPLATQYPLVTYTFGFTGRSELDTAFGLTPRIVFTATDADVIKTYVRLGLGVGVIASMAVDDPDLVKLDANGIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTF
7SP31iz1a0.1760.9785.179threading_7MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAADVGELSVAYFGTPIYRSLPLLLRAFLT---STPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFAVELTLFPRGPSFADEVIGLFGIEPRIARVVEDATAALALTMAGAASSIVPASVAAWPDIAFARIVGTRVKVPISCIFRKEK-QPPILARFVEHVRRSA--
8SAM-T991iz1B0.1670.9863.220threading_8MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAARDVGELSVAYFGTPIYRSLPLLLRAFLT---STPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGLRAVELTLFPRGPSFADEVIGLFGIEPRIARVVEDATAALALTMAGAASSIVPASVAAIRWPDIAFARIVRVKVPISCIFRKEKQ-PPILARFVEHVRRSAKD
9MUSTER3fxrA0.1530.9862.748threading_9LKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQGRWEGHITFAASPAIALAALPLALASFAREF---PDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKIDTDLEAQPLYVSDVVIVGQRQHPMAQECRWAFSSAPRGPGAIIRNAFGLPPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNDQLCSILQDALPNPTIYVLRRHDLPVTPAAAGLIRWIQHHAL-
10SPARKS3fxra0.1490.9864.877threading_10LKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQGRWEGHITFAASPAIALAALPLALASFARE---FPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDTDLEAQPLYVSDVVIVGQRQHPMANECRWAFSSAPRGPGAIIRNAFGLPPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNAFCSIPLQDALPNPTIYVLRRHDLPVTPAAAGLIRWIQHHAL-

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.796 to 1iz1B
SCOP code=a.4.5.37
TM-score=0.782 to 1iz1B
SCOP code=a.4.5.37
TM-score=0.774 to 1iz1B
SCOP code=a.4.5.37
TM-score=0.764 to 1iz1B
SCOP code=a.4.5.37
TM-score=0.851 to 1iz1B
SCOP code=a.4.5.37