Template-based Modeling Results for HYDN_ECOLI


  Submitted Primary Sequence

>Length 175
MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRIHVIKGVNISTATVCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVIRNSGAGLNVRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKLEQLSAEKRRRTALMF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRIHVIKGVNISTATVCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVIRNSGAGLNVRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKLEQLSAEKRRRTALMF
CCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCEEECCCCEEEECCCCCCCCCCCHHCCCCCCCEEECCCEEEECCCCCCCHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRIHVIKGVNISTATVCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVIRNSGAGLNVRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKLEQLSAEKRRRTALMF
4211000012301003000100131243333212020111122121242210000110210320100300112000234100000333010010001001110010123222332221232423312010011023233101002101130000012320231013223211223
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRIHVIKGVNISTATVCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVIRNSGAGLNVRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKLEQLSAEKRRRTALMF
1MUSTER2vpzB0.3040.9033.873threading_1MRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVG-EYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQKDGLVLVDPKKCIACGACIAACPYDARYLH----------------PAGYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKAAERVD
2SPARKS1h0hb0.2390.9094.622threading_2-SKGFFVDTTRCTACRGCQVACKQWHGNPATPTENTLVRMHEQEIDGRIDWLFFPDQCRHCIAPPCKATADMSAIIHATGCVLFTPKDLEDYESVISACPYDVPRK---------------VAESNQMAKCDMCIDRGLRPACVTSCPTGAMNFGDLSEMEAMASARLAEIKAAY
3PROSPECT22vpwB0.3040.9033.240threading_3MRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVG-EYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQKDGLVLVDPKKCIACGACIAACPYDARYL----------------HPAGYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKAESEVH
4PPA-I2vpzB0.2970.9037.160threading_4PRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVG-EYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQKDGLVLVDPKKCIACGACIAACPYDARYLH----------------PAGYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKAAERVD
5HHPRED-l1kqf_B0.2470.9264.369threading_5KAEVKLIDVSTCIGCKACQVACSEWNDIRDEVGHCVGVRFSETEQNGKLEWLIRKDGCMHCEDPGCLKACPSAAIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDN------------RVYKCTLCVDRVSVGQEPACVKTCPTGAIHFGTKKEMLELAEQRVAKLKGV-
6HHPRED-g2ivf_B0.2870.9144.771threading_6RQLVTVIDLNKCLGCQTCTVACKNIWTKRPGMRWNNVTTYQGGGKWPNPFFFYLARMCNHCTNPACLAACPTGAIYKENGIVLVDQERCKGHRHCVEACPYKAIYFN---------------PVSQTSEKCILCYPRGIANACNRQCPGRVRAFGYLDDTTSHVHKLVKKWALPL
7SP31h0hb0.2390.9094.477threading_7-SKGFFVDTTRCTACRGCQVACKQWHGNPATPTENKLVRMHEQEIDGRIDWLFFPDQCRHCIAPPCKATADMSAIIHATGCVLFTPKDLEDYESVISACPYDVPRKV---------------AESNQMAKCDMCIDRGLRPACVTSCPTGAMNFGDLSEMEAMASARLAEIKAAY
8SAM-T992vpzB0.3090.8695.487threading_8-RYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIR-EREVGEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQKDGLVLVDPKKCIACGACIAACPYDARYLHPAG----------------YVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKA-----
9MUSTER1ti4B10.2630.8913.403threading_9MQYYMVIDVAKCQDCNNCFMGCMDEHELNEGHRWMNIERRERG-TYPRNDINYRPTPCMHCENAPCV-AKGNGAVYQEDGIVLIDPEKAKGKKELLDTCPYGVMYWN---------------EEENVAQKCTMCAHLPKMPRCAHNCGSFV--YEFLKTTPEAMAKKVEEEGLEV
10SPARKS2vpwb0.3040.9034.602threading_10MRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVG-EYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTDGLVLVDPKKCIACGACIAACPYDARYLH----------------PAGYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKAAERVD

  Predicted Tertiary Structure

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TM-score=0.735 to 1ti4B
SCOP code=b.3.5.1
TM-score=0.732 to 1ti4B
SCOP code=b.3.5.1
TM-score=0.794 to 1h0hB
SCOP code=d.58.1.5
TM-score=0.722 to 1ti4B
SCOP code=b.3.5.1
TM-score=0.735 to 1ti4B
SCOP code=b.3.5.1