Template-based Modeling Results for LHGO_ECOLI


  Submitted Primary Sequence

>Length 422
MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESAPACHQTGHNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQNGIRYDNCGKMLVATSDLEMERMRALWERTAANGIEREWLNADELREREPNITGLGGIFVPSSGIVSYRDVTAAMAKIFQSRGGEIIYNAEVSGLNEHKNGVVIRTRQGGEYEASTLISCSGLMADRLVKMLGLEPGFIICPFRGEYFRLAPEHNQIVNHLIYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKREGYRKRDFSFSDTLEILGSSGIRRVLQNHLRSGLGEMKNSLCKSGYLRLVQKYCPRLSLSDLQPWPAGVRAQAVSPDGKLIDDFLFVTTPRTIHTCNAPSPAATSAIPIGAHIVSKVQTLLASQSNPGRTLRAARSVDALHAAFNQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESAPACHQTGHNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQNGIRYDNCGKMLVATSDLEMERMRALWERTAANGIEREWLNADELREREPNITGLGGIFVPSSGIVSYRDVTAAMAKIFQSRGGEIIYNAEVSGLNEHKNGVVIRTRQGGEYEASTLISCSGLMADRLVKMLGLEPGFIICPFRGEYFRLAPEHNQIVNHLIYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKREGYRKRDFSFSDTLEILGSSGIRRVLQNHLRSGLGEMKNSLCKSGYLRLVQKYCPRLSLSDLQPWPAGVRAQAVSPDGKLIDDFLFVTTPRTIHTCNAPSPAATSAIPIGAHIVSKVQTLLASQSNPGRTLRAARSVDALHAAFNQ
CCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEECCHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHCCCCCCCCEEECCCCEEECHHHHHHHHHHHHHHCCCEEEECCEEEEEEEECCEEEEEECCCCEEEECEEEECCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCCCCEEEEEEECCCEEEECCCEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCEECCCCCCCEEECCCCCCCCCEEEECCCCEEEEECCCCHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESAPACHQTGHNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQNGIRYDNCGKMLVATSDLEMERMRALWERTAANGIEREWLNADELREREPNITGLGGIFVPSSGIVSYRDVTAAMAKIFQSRGGEIIYNAEVSGLNEHKNGVVIRTRQGGEYEASTLISCSGLMADRLVKMLGLEPGFIICPFRGEYFRLAPEHNQIVNHLIYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKREGYRKRDFSFSDTLEILGSSGIRRVLQNHLRSGLGEMKNSLCKSGYLRLVQKYCPRLSLSDLQPWPAGVRAQAVSPDGKLIDDFLFVTTPRTIHTCNAPSPAATSAIPIGAHIVSKVQTLLASQSNPGRTLRAARSVDALHAAFNQ
31000000000000000010022233120000113211123211100000100112221211010011002003200321202011001000001321032021003201312121100113003332120212000001210100021001000210232202001102011022233101011243120201000000000002003102132212000010100102333332132101101232131100000211211000001001023332243221202100210112111200120022001201220022001210241023022220111000020101133231130000121320000010302100001100110011022113233232222222322221112134
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESAPACHQTGHNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQNGIRYDNCGKMLVATSDLEMERMRALWERTAANGIEREWLNADELREREPNITGLGGIFVPSSGIVSYRDVTAAMAKIFQSRGGEIIYNAEVSGLNEHKNGVVIRTRQGGEYEASTLISCSGLMADRLVKMLGLEPGFIICPFRGEYFRLAPEHNQIVNHLIYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKREGYRKRDFSFSDTLEILGSSGIRRVLQNHLRSGLGEMKNSLCKSGYLRLVQKYCPRLSLSDLQPWPAGVRAQAVSPDGKLIDDFLFVTTPRTIHTCNAPSPAATSAIPIGAHIVSKVQTLLASQSNPGRTLRAARSVDALHAAFNQ
1MUSTER3dmeA0.2690.8362.542threading_1DIDCIVIGAGVVGLAIARALAAG--GHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARGVPHQRLGKLIVATSDAEASQLDSIARRAGANGVDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGATLSCRVLINAAGLHAPGLARRIEGIPRDSIPPCKGSYFTLAGRA--PFSRLIYPVP--QHAGLGVHLTLDLGGQAKFGPDTEWI-ATEDYTLDPRRA---------------------------------DVFYAAVRSYWPALPDGALAPGYTGIRPKISGPH-EPAADFAIAGVAGLVNLYGIESPGLTASLAIAEETLARLA----------------------------
2SPARKS3dmea0.2660.8364.291threading_2DIDCIVIGAGVVGLAIARALAAGG--HEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARGVPHQRLGKLIVATSDAEASQLDSIARRAGANGVDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFEPMTLSCRVLINAAGLHAPGLARRIEGIPRDSIPPCKGSYFTLAGRAP--FSRLIYPVPQH--AGLGVHLTLDLGGQAKFGPDTEWI-ATEDYTL---------------------------------DPRRADVFYAAVRSYWPALPDGALAPGYTGIRPKISGP-HEPAADFAIAGVAGLVNLYGIESPGLTASLAIAEETLARLA----------------------------
3PROSPECT23dmeA0.2580.8364.501threading_3TIDCIVIGAGVVGLAIARALAA--GGHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARGVPHQRLGKLIVATSDAEASQLDSIARRAGANGVDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGATLSCRVLINAAGLHAPGLARRIEGIPIPPEYLCKGSYFTLAGRAP--FSRLIYPVPQH--AGLGVHLTLDLGGQAKFGPDTEWI----ATEDYTLDPRRA------------------------------DVFYAAVRSYWPALPDGALAPGYTGIRPK-ISGPHEPAADFAIAGVAGLVNLYGIESPGLTASLAIAEETLARL----------------------------A
4PPA-I3dmeA0.2690.8363.930threading_4DIDCIVIGAGVVGLAIARALAAGG--HEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARGVPHQRLGKLIVATSDAEASQLDSIARRAGANGVDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGATLSCRVLINAAGLHAPGLARRIEGIPRDSIPPEKGSYFTLAG--RAPFSRLIYPVPQH--AGLGVHLTLDLGGQAKFGPDTEWI-ATEDYTLDPRRA---------------------------------DVFYAAVRSYWPALPDGALAPGYTGIRPKISGP-HEPAADFAIAGVAGLVNLYGIESPGLTASLAIAEETLARLA----------------------------
5HHPRED-l1pj5_A0.1760.9152.666threading_5TPRIVIIGAGIVGTNLADELVTR--GWNITVLDQGPLMPGGSTSHAPGLVFQTN---PSKTMASFAKYTVEKLLSLTEDGVSCFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPLLNILGGLHVPSDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADGVIPADIVVSCAGFWGAKIGAMIGMAVP--LLPLAHQYVKTTPVPAQQGRNDGARLPILRHQDQDLYYR-EHGDRYGIGSYAHRPMPVDVDTLGAYAPETV----SEHH----------MPSRLDFTLEDFLPAWEATKQLLPALADSEIEDGFNGIFS--FTPDGGPLLGESK-ELDGFYVAEAV---WVTHSAGVAKAMAELLTTGRSGECDITRF-------EDVQLTYV-
6HHPRED-g3dme_A0.2580.8362.690threading_6DIDCIVIGAGVVGLAIARALAAG--GHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARGVPHQRLGKLIVATSDAEASQLDSIARRAGANGVDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVPEGGFELDFGGAMTLSCRVLINAAGLHAPGLARRIGIPRDPPEYLCKGSYFTLAGRA--PFSRLIYPVPQHA--GLGVHLTLDLGGQAKFGPDTEWI---ATED-YTLDPR------------------------------RADVFYAAVRSYWPALPDGALAPGYTGIRPKISGPHE-PAADFAIAGVAGLVNLYGIESPGLTASLAIAEETLARLA----------------------------
7SP33dmea0.2660.8364.463threading_7DIDCIVIGAGVVGLAIARALAAGG--HEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARGVPHQRLGKLIVATSDAEASQLDSIARRAGANGVDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFEPMTLSCRVLINAAGLHAPGLARRIEGIPRDSIPPCKGSYFTLAGRA--PFSRLIYPVPQH--AGLGVHLTLDLGGQAKFGPDTEW-IATEDYT---LDPRRADV------------------------------FYAAVRSYWPALPDGALAPGYTGIRPK-ISGPHEPAADFAIAGVAGLVNLYGIESPGLTASLAIAEETLARLA----------------------------
8SAM-T993dmeA0.2560.8326.083threading_8--DCIVIGAGVVGLAIARALAAG--GHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARGVPHQRLGKLIVATSDAEASQLDSIARRAGANGVDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGATLSCRVLINAAGLHAPGLARRIPRDSIPPEYLCKGSYFTLAGRAP--FSRLIYPVPQH--AGLGVHLTLDLGGQAKFGPDTEWIATED----------------------------------YTLDPRRADVFYAAVRSYWPALPDGALAPGYTGIRPKISGP-HEPAADFAIAGPAGLVNLYGIESPGLTASLAIAEETLARLA----------------------------
9MUSTER1y56B0.1680.8602.099threading_9LSEIVVIGGGIVGVTIAHELAKR--GEEVTVIEKRF-IGSGSTFRCGTGIRQQFNDE---ANVRVMKRSVELWKKYSEEYGFSFKQTGYLFLLYDDEEVKTFKRNIEIQNKFGVPTKLITPEEAKEIVPLLDIIAASWNPTDGKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKGIIKTGIVVNATNAWANLINAMAGIKTKIPIEPYKHQAVITQPIKRGTINPMVISFKYGH-----AYLTQTFHGGIIGGIG------YEIGPTYDLT----------------------------PTYEFLREVSYYFTKIIPALKNLLILRTWAGYYAKT--PDSNPAIGRI--ELNDYYIAAGFSGHGFMMAPAVGEMVAELITKLPVEWYDPYRFERGELR----------
10SPARKS1y56b0.1650.8633.494threading_10LSEIVVIGGGIVGVTIAHELAKR--GEEVTVIEKRF-IGSGSTFRCGTGIRQQFNDE---ANVRVMKRSVELWKKYSEEYGFSFKQTGYLFLLYDDEEVKTFKRNIEIQNKFGVPTKLITPEEAKEIVPLLDIIAASWNPTDGKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKGIIKTGIVVNATNAWANLINAMAGIKTKIPIEPYKHQAVITQPIKRGTINPMVISFKYGH-----AYLTQTFHGGIIGG------IGYEIGPTYDLTP----------------------------TYEFLREVSYYFTKIIPALKNLLILRTWAGYYAK--TPDSNPAIGRI-EELNDYYIAAGFSGHGFMMAPAVGEMVAELITKGKTKLYDPYRFERGELR----------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.758 to 2gb0B
SCOP code=c.3.1.2
TM-score=0.758 to 2gb0B
SCOP code=c.3.1.2
TM-score=0.762 to 2gb0B
SCOP code=c.3.1.2
TM-score=0.770 to 2gb0B
SCOP code=c.3.1.2
TM-score=0.756 to 2gb0B
SCOP code=c.3.1.2