Template-based Modeling Results for LIT_ECOLI


  Submitted Primary Sequence

>Length 297
MRSPICHLFSAINSSPFKIAPEKEQDLKTIVDDKKIIISVVSEPGFNIRVRKNESNNSHEIVLTVASLEYIWAFSNFFWVFTQEYSKSQKNNDEHFDLTGKNRLKKSDELLKWARKNLQTTGCESWPKKCPKPEAYLQGSEDSQVASEIFLCAIAWILHHEISHVVLQHPLVTTAFSTQEEREADSHATKWILGNLYESAPELKKRALGIATAVLCIQSLEVENYFCLQNTHPAAYERIYSNISCYPVGNEELIEALCTVMLQYLFHGKNINVNLDGESFSSILGDLLCDISRLTSN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRSPICHLFSAINSSPFKIAPEKEQDLKTIVDDKKIIISVVSEPGFNIRVRKNESNNSHEIVLTVASLEYIWAFSNFFWVFTQEYSKSQKNNDEHFDLTGKNRLKKSDELLKWARKNLQTTGCESWPKKCPKPEAYLQGSEDSQVASEIFLCAIAWILHHEISHVVLQHPLVTTAFSTQEEREADSHATKWILGNLYESAPELKKRALGIATAVLCIQSLEVENYFCLQNTHPAAYERIYSNISCYPVGNEELIEALCTVMLQYLFHGKNINVNLDGESFSSILGDLLCDISRLTSN
CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MRSPICHLFSAINSSPFKIAPEKEQDLKTIVDDKKIIISVVSEPGFNIRVRKNESNNSHEIVLTVASLEYIWAFSNFFWVFTQEYSKSQKNNDEHFDLTGKNRLKKSDELLKWARKNLQTTGCESWPKKCPKPEAYLQGSEDSQVASEIFLCAIAWILHHEISHVVLQHPLVTTAFSTQEEREADSHATKWILGNLYESAPELKKRALGIATAVLCIQSLEVENYFCLQNTHPAAYERIYSNISCYPVGNEELIEALCTVMLQYLFHGKNINVNLDGESFSSILGDLLCDISRLTSN
552210201210232214103331310220023330100002310010202323233221000210001000000000000021003123332331312233303312200310130012201321233022132123223202100100000000000010010103132222211231121001100210011023103311120000000000021022322112332101022001101211322323101000000010002233120313132022000100010231234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMRSPICHLFSAINSSPFKIAPEKEQDLKTIVDDKKIIISVVSEPGFNIRVRKNESNNSHEIVLTVASLEYIWAFSNFFWVFTQEYSKSQKNNDEHFDLTGKNRLKKSDELLKWARKNLQTTGCESWPKKCPKPEAYLQGSEDSQVASEIFLCAIAWILHHEISHVVLQHPLVTTAFSTQEEREADSHATKWILGNLYESAPELKKRALGIATAVLCIQSLEVENYFCLQNTHPAAYERIYSNISCYPVGNEELIEALCTVMLQYLFHGKNINVNLDGESFSSILGDLLCDISRLTSN
1PROSPECT21hzfa0.1350.8451.412threading_1LRLPAASRYLDKTEQWSTLPPETKDHAVDLIQKGYMRIQQFRKADGSYAAWLSRDSS-------------TWLTAFVLKVLSLAQEQ------------VGGSPEKLQETSNWLLSQQQADGSFQDPCPVLDRSQGGLVGND----ETVALTAFVTIALHHGLA---VFQDEGAEPLKQRVEASISKASSFLGEKASAGLLGAHAAAITAYALTL--------------TKAPADLRGVAHNNLAWGQAPALWIETTAYALLHLLLHEGSFQGGFRSTQDTVIALDALSAYWIASHT
2HHPRED-l3c37_A0.2110.5891.625threading_2------------------------------------------------------KGFN-I------SIEQEKELGNKFAVEIEKQQQPVN------DPEVQRY---VDKVGKRLLSGARAV-EFDYVFKDDSVNAFAPG-GRVYVHTGLLKAELAGVLAHEINHAVARHGAG--SYSREYENQADFLGVET-YKAGYNPNGSFFQKLNA---------------------THPLTSERIQRVQAEIAKLPPQ-------------------RYLTDETEFKKIKGRL-----KLE--
3HHPRED-g3c37_A0.1760.5721.420threading_3------------------------------------------------------KGFN-I------SIEQE-------KELGNKFAVEIEKQQQ--PVNDPEVQRYVDKVGKRLLSGARAV-EFDYVFKDDSVNAFAI--PGGRVHTGLLKTELAGVLAHEINHAVARHGTG--SYSREYENQADFLGVET-YKAGYN--PN----GLTSFF--QKLNA-----------THPLTSERIQRVQAEIAKLPDETEFKKIKGRLKLE--------------------------------
4PROSPECT23a0oA30.0790.9801.311threading_4GRSALSAFADAVAKDP------NHCGWAEFYEKSVEPWLERPVMPEPQPYPNNTRVATLWRQMYIDCQEVIYAIRHLAIAGRDDLLDASRKAWDTKGATSRAYNDEAGFRVVVALAWGYDWLYDHLSEAHARIHVFPYDSHAVRSLSAVLTPACIALYTVEFLATLYSPWAGTDAEGPHYWMTGMAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPLYTKAPGTRRDSTLGDLPGLKLGYNVRQFAGVTGNGHYQWYFDHIKADATGTEMAFYNYGWWDLNFDDLVYRHDYPQVEAV
5HHPRED-l3dte_A0.1300.5961.250threading_5-----------------------------------------------------------PTALAKAR-RELAASYGAGL-------PGRDTGLDGITLTF----G-----------QR--DGAY-DPEH---H--VILNSQVR-------PERQRFTLAHEISHALLLGDDDLLSDEQVIETLCNVGAAALL-PAEDDLLTRELARRADVSATSALYALAERTAPPVSRSASAGVKYSLSA---GTPVPDDHP----AALALDT---RLPLAQDSYVPSGRR-PAY-----------
6PROSPECT21yt3A0.1140.9461.221threading_6MNDALASLCEAVRAFPAPLGITDWSPLKAILRDPSITKFLFCGRPMSWGDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMVE---------TEASGWLPAALDECRLMQMRRQ-------EVVAPEDAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVREEHLWSVARYMPGSLGELDSLGLSGSEIRFHGKTLLALVEKAQTLPEDALPQPMLNMPGYRKAFKAIKSLITDVSETHLLASRRQINQLLNWHWKLKPQNNLPELGELMAEALHNLLQEYPQ
7PROSPECT21ct9a10.0990.8861.204threading_7LRQALEDSVKSHLMSDVPYGGLDSSIISAITKKYALHSFAVGLPGSPDEVANHLGTVHHEIHFTVQEGLDAIRDVIYHI-----------------ETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGYLYFHKAPNAKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKK-----FLDVAMRINPQDKMCKMEKHILRECFEAYLPASVAWRQKEQFSDGVGYSWIDTLKEVAAQQVSDQQLETARFR------------FPYNTPTSKEAYLYREIFEAAECVPG
8PROSPECT21miva0.1060.9491.191threading_8KPQEALGIIQQLKQHGYDALPEDVAIFPKTIDVSKHGTVVVVHKGKAYEVTTFKTDGSVTFVRSLEEDLAVRFVSELTEQAIVQNAPLLAHISVERTEEKLLGGPFAARALPLLAETGLNAYLPGLAGKEKQLRLAAAYRWPWLAAREERWALLCHALGVQESRPFLRA----WKLPNKVVDEAGAILTALADIPRPEAWTNEQLFSAGLERALSVETVRAAFT----GAPPGPWHEKLRRRFASLPIKTKGE----LAVNGKDVIEWVGKP---AGPWVKEALDAIWRRIYAWLER
9MUSTER1t5jA0.1260.9060.721threading_9MRDILGSVFGAV-GMPTENLT--KEEIKKLYGFVDSYV----EPKNYLAGKLNKGEWTDDTEQAICLIKSLTKEGIDIKKFANCLIAWKNKNPPDIG-------LTSLMAIDKLENNDYSGVDSSSCGAANNLKKLKEEVIKASKINNKTAIAGALAIAFFVSSALKDRKDFSDECYNYIKDIDEEFAKKLLLDYIYDYFGTGVKTDEVVPSAIATYLL------------TDNFKEGMLKCINAG--GDTDSLASMYGAMAGAYYGFKNIPKEIDGLKNKEVIFELAERLYHLATE
10SPARKS3sqna0.0680.9970.624threading_10PQSISIQLLKELLFTKELVTTSFLSTYETLKRHIK-KNQALRDFHLTIQLTTTIQLIGAESNIRIFYHRLLVPFTFDDYSIHEEHYFQFLKQVYSSELTVETEEIFGACWFFINTIRNKANCRVSQFSFDSKDVLFQLYQPSLAKLYASEGEESFFAFFCFLESWNYDNVYGETLASALHTSQLRKSLQQFVTNLSTEEARPDLIQLLDNLLLLFIKYTESPTLSEQFQLEYQELSKSNQELLEILSIEEPTYFLSLASLLEKQAIYSIQAQTTFLFQGEPAWKAFLQQELAAYLGT

  Predicted Tertiary Structure

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TM-score=0.819 to 1hzfA
SCOP code=a.102.4.4
TM-score=0.408 to 1xm5A
SCOP code=d.92.1.15
TM-score=0.397 to 3dwkC
SCOP code=d.2.1.10
TM-score=0.623 to 1j0nA
SCOP code=a.102.3.2
TM-score=0.362 to 1rq6A
SCOP code=a.4.15.1