Template-based Modeling Results for LSRD_ECOLI


  Submitted Primary Sequence

>Length 330
MRIRYGWELALAALLVIEIVAFGAINPRMLDLNMLLFSTSDFICIGIVALPLTMVIVSGGIDISFGSTIGLCAIALGVLFQSGVPMPLAILLTLLLGALCGLINAGLIIYTKVNPLVITLGTLYLFAGSALLLSGMAGATGYEGIGGFPMAFTDFANLDVLGLPVPLIIFLICLLVFWLWLHKTHAGRNVFLIGQSPRVALYSAIPVNRTLCALYAMTGLASAVAAVLLVSYFGSARSDLGASFLMPAITAVVLGGANIYGGSGSIIGTAIAVLLVGYLQQGLQMAGVPNQVSSALSGALLIVVVVGRSVSLHRQQIKEWLARRANNPLP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRIRYGWELALAALLVIEIVAFGAINPRMLDLNMLLFSTSDFICIGIVALPLTMVIVSGGIDISFGSTIGLCAIALGVLFQSGVPMPLAILLTLLLGALCGLINAGLIIYTKVNPLVITLGTLYLFAGSALLLSGMAGATGYEGIGGFPMAFTDFANLDVLGLPVPLIIFLICLLVFWLWLHKTHAGRNVFLIGQSPRVALYSAIPVNRTLCALYAMTGLASAVAAVLLVSYFGSARSDLGASFLMPAITAVVLGGANIYGGSGSIIGTAIAVLLVGYLQQGLQMAGVPNQVSSALSGALLIVVVVGRSVSLHRQQIKEWLARRANNPLP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MRIRYGWELALAALLVIEIVAFGAINPRMLDLNMLLFSTSDFICIGIVALPLTMVIVSGGIDISFGSTIGLCAIALGVLFQSGVPMPLAILLTLLLGALCGLINAGLIIYTKVNPLVITLGTLYLFAGSALLLSGMAGATGYEGIGGFPMAFTDFANLDVLGLPVPLIIFLICLLVFWLWLHKTHAGRNVFLIGQSPRVALYSAIPVNRTLCALYAMTGLASAVAAVLLVSYFGSARSDLGASFLMPAITAVVLGGANIYGGSGSIIGTAIAVLLVGYLQQGLQMAGVPNQVSSALSGALLIVVVVGRSVSLHRQQIKEWLARRANNPLP
552320111000000000000000002200113101100110000000000000000001010000000000000000002120100000000000000001001000110301100000000000000000001221121231112112001210223211111100000000100001123131010000002013002113030320000000000000000000000100112131010100000000000001021010100000000000000210020010221001000000000000021011123202212233243334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMRIRYGWELALAALLVIEIVAFGAINPRMLDLNMLLFSTSDFICIGIVALPLTMVIVSGGIDISFGSTIGLCAIALGVLFQSGVPMPLAILLTLLLGALCGLINAGLIIYTKVNPLVITLGTLYLFAGSALLLSGMAGATGYEGIGGFPMAFTDFANLDVLGLPVPLIIFLICLLVFWLWLHKTHAGRNVFLIGQSPRVALYSAIPVNRTLCALYAMTGLASAVAAVLLVSYFGSARSDLGASFLMPAITAVVLGGANIYGGSGSIIGTAIAVLLVGYLQQGLQMAGVPNQVSSALSGALLIVVVVGRSVSLHRQQIKEWLARRANNPLP
1SPARKS2dri_0.0940.7121.139threading_1-----------------IALVVSTLNNPFFVKDGAQKEADKL--------GYNLVVLDSQNN------PAKELANVQDLTVRG-------------------TKILLINPTDSDA---------VGNAVKMANQANIPVITLDRQATKGEVVSHIASD----------NVLGGKIAGDYIAKKAGEGAKVIELQGIQQAVAAHKFNVLASQPADFDRIKGLNVMQNLLTA------HPDVAQN---DEMALGAL--RALQTGKSDVM-------VVGF--------DGTPDGEKAVNDGKLAATIAQLPDQIGAKGVETADKVLKGEKVQ
2PROSPECT21ee4a0.0680.9851.577threading_2QELPQMTQQMQEQLSATVKFRQILSREHRPPIDVVIQVVPRLVEMLQLEAAWALTNIASGTSAQTKVVVDAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMD-----TETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNILQTQVVIVLPALRLLLSSPKENIKKEACWTISNITAGNANLIPPLVKLLTKKEACWAISNASSGGLQRPDINRIIEVTLDALENILKMGEADKEAGMEKIFNCQQNEND
3PPA-I2nq2A0.1230.8641.218threading_3----YPKILFGLTLLLVITAVISLGIGRYIDPVQQQVIFQVRLPRILTALCVGAGLALSGVNPHIIGVTSGSAFGGTLAIFFGFSLYGLFTSTILFGFGTLALVFLFSFKSLLMLILIGMILSGLFSALVSLLQ------YISDTEEKLPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSIL-LSLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQVAISG-------SIGWVGLIIPHLSRMLVGASLL------PCTMLVGATYMLLVDNVARSLSIPISILTALIGAPLFGVLVYKL---------------------
4HHPRED-l2nq2_A0.1350.8551.340threading_4----YPKILFGLTLLLVITAVISLGIGYSLSVPDVQQVIFQRLPRILTAVGAGLALIFRNVNIGVTSGSAFGGTLAI-FFG--FSLYGLFTSTILFGFGTLALVFLFSFK---SLILIGMILSGLFSALVSLLQYI-----SDTEEK-LPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSI-LLSLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQ-V---AISGS---IGWVGLIIPHLSRMLVGA-NH--QSLLPCTMLVGATYMLLVDNVARDAEIPISILTALIGAPLFGVLVYKL---------------------
5PROSPECT21ejlI0.0920.9851.569threading_5VKGINSNNLESQLQATQAARKLLSREKQPPLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHND-----PEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSITAGRLSKADFKTQKEAAWAITNYTQIVYLVHCGIIEPLTKIIQVILDAISNIFQAAEKLSIMIEEKIEALQRHENE
6PPA-I1l7vA0.1210.8551.063threading_6QQRQNIRWLLCLSVLLLALLLSLCAGEQWISPGDWQIRLPRTLAVLLVGAALAISGAVQALLLGVSNGAGVGLIAAVLLGQGQLPNWALGLCAIAGALIITLILLRFARRHLSTLLLAGVALGIICSALTWAIYFSTSVDLRQLYWGG-------FGGVDWRQSWLLALIPVLLWICCQSRPNLALG---------EISARQLGLPLWFWRNVLVAATGWVGVSVALAG---------AIGFIGLVIPHILRLCGLTDHR--VLLPGCALAGASALLLADIVARLALLPIGVVTATLGAPVFIWLLLKA---------------------
7HHPRED-l2qi9_A0.1310.8301.249threading_7QRQNIRWLLSLSV-L-LLALLLSLSAGQWFTPRG-ELFVWQRLPRTLAVVGAALAILFENAELGVSNGAGVGLIAAV-LLGQGLPNWALGLSAIAGALIITLILLRFARR-HLSTLLAGVALGIISSAL-TWAIYF-----STS-VDLR-QL-YW--GGFGGVDWRQSWL-LALPVLLWISS---QSRP---LALGEISARQLGLPLWFWRNVLVAATGW-VGVSV----ALAG---AIGFIGLVIPHILRLSGLT-D---HRVLLGCALAGASALLLADIVAAAAELPIGVVTATLGAPVFIWLLLK----A-----------------
8PROSPECT22fozA0.1430.8671.452threading_8MASLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQYYTDDTAMARALVQSLLAPDRGYGAGVVTVFKKLVFEPARAQFNGKGSYGNGGAMRVAGISLAFARLSAQLTHASSLGYNGAILQALAVHLALQGESSLGHMEDLEGDAQSVLDARELGMEER-----PYSSRLKKIGELLDQASVTR--------EEVVSELGNGI-------AAFESVPTAIYCFLRCMEPDPEIPSAFNSLQRTLIYSISLGGDT------DTIATMAGAIA--GAYYGMD--QVPESWQQSCEGYEETDILAQSLHRVF--------------QKS
9PROSPECT21xm9A0.0980.9881.435threading_9QQVYQLGGICKLVDLVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVQLTGLLWNLSSTDELIADALPVLADRVIIPFSGWCVVDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQVENCMCVLHNLSYRLDAEVPTRYRQLEYNALPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLTASKGLMSSGMSQLIGLKEKGLPQIARLLSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSAC--YTVRNLMA--SQPQLAKQYFSMLNNIINLCRSSASPKAAEAARLLSSKELQGVL
10PROSPECT23a6pA10.1070.9611.404threading_10AEKTQVAIVRHFGLQIVMELIANGTLNILEEENHIKDALSRIVVEMIKMLIELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPPQMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLAGYIDWVSAENCKLLEILCLLLNEQELRKGKLEDRKPLMVLFGDVAMHYILSAAQTADGGGLVEKHYVF-----------LKRLCQVLCALGNQLCALLGADSDVETPSNFGKYLESFLAFTTRHEILSRDPLLLAIIPKYLRASMTEYSRFDFDSAFFNSSRAQQGEVMRLACRLDPKTFQMAGEWLKYQLST--F

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.734 to 1t5jA
SCOP code=a.209.1.1
TM-score=0.659 to 1gcgA
SCOP code=c.93.1.1
TM-score=0.777 to 1ialA
SCOP code=a.118.1.1
TM-score=0.770 to 1l7vA
SCOP code=f.22.1.1
TM-score=0.770 to 1l7vA
SCOP code=f.22.1.1