Template-based Modeling Results for MACA_ECOLI


  Submitted Primary Sequence

>Length 371
MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTKAVSQQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTKAVSQQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCEEEEEEEEEEEEEEEEEEECCCCEEEEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEECCCCCEEECCCCCCEEEEEEECCEEEEEEEECHHHHHHHCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCEEECHHHHEECCCCCEEEEEECCCCEEEEEEEEEEEECCCEEEEECCCCCCCEEEECCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTKAVSQQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ
55443221110000000000000001322323212120010220312210201010101220200031201021010222220243100010023301210320111012121212211111320211121123114241112310220022111121101101110231110021022213102010101020000203201001123312100000101201020201121023033222020101123322020102001122242310010001010212312021200010102123243000002100022333220001024412122120100122321010131033211000231233234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTKAVSQQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ
1MUSTER3fppB0.9890.7203.239threading_1-----------------------------------------RPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLT---------------------------------------------------------------
2SPARKS3lnna0.2080.8925.787threading_2-----------------ALRHEGERLVVPAESPRTLAVAPATRETVAAPFNLPAMIEAAKLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSAD-----------LAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGGTLQGGHILAVRSPINGRVVDLNAATGAYWNDTTAS--LMTVADLSHVFVTANAQEKDLGHVYVGQSATVKF-DAYDDPQPGKVRYVGQILDADTRTTKVRMVFD--NPDGRLRPGMFAQATFLSQPHE-GIVVPMSAIVQS-GFYTRAFVEVAPWQFEPRVIKLGAQIGDRMEVKSGLSAGDRVVVKE-----GV
3PROSPECT23fppA0.9850.7175.141threading_3------------------------------------------PGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVL---------------------------------------------------------------T
4PPA-I3fppB0.9890.7206.485threading_4-----------------------------------------RPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLT---------------------------------------------------------------
5HHPRED-l3fpp_A0.9890.7175.896threading_5------------------------------------------PGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLT---------------------------------------------------------------
6HHPRED-g1vf7_A0.2320.6045.327threading_6----------------------------------------------TLNTELPGRTNAFRIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLAS--------------TQEQAQRYKLLVADQAVSKQQYADANAAY--------------LQSKAAVEQARINLRYTKVLSPISGRIGRSAVTEGALVTNGQ-ANAMATVQQLDPIYVDVTQPSTALLRLRRAAKVSLKLEDGSQYPLEGRLEFSEVSVDEGTGSVTIRAVF--PNPNNELLPGMFVHAQLQEG----------------------------------------------------------------------
7SP33lnna0.2080.8925.376threading_7-----------------ALRHEGERLVVPSPLRRTLAVAPATRETVAAPFNLPAMIEAAKLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSAD-----------LAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGGTLQGGHILAVRSPINGRVVDLNAATGAYWNDTTAS--LMTVADLSHVFVTANAQEKDLGHVYVGQSATVKF-DAYDDPQPGKVRYVGQILDADTRTTKVRMVFD--NPDGRLRPGMFAQATFLSQP-HEGIVVPMSAIVQS-GFYTRAFVEVAPWQFEPRVIKLGAQIGDRMEVKSGLSAGDRVVVKE-----GV
8SAM-T993fppB0.9850.7206.572threading_8-----------------------------------------RPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVL--------------------------------------------------------T-------
9MUSTER2v4dM0.1950.8273.154threading_9---------------------------------PEVGIVTLEAQTVTLNTELPGRTNAFRIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQAQRYKLLVAD--------------QAVS--------------KQQYADANAAYLQSKAAVEQARINLRYTKVLSPISGRIGRSAVTEGALVTNGQANA-MATVQQLDPIYVDVTQPSTALLRLRRELKVSLKLEDGSQYPLEGRLEFSEVSVDEGTGSVTIRAVFP--NPNNELLPGMFVHAQLQEGVKQKAILAPQQGVTRDLKGQATALVVNAQNKVELRVIKADRVIGDKWLVTEGLNAGDKIITEGVQPGVTV
10SPARKS3fppa0.9890.7174.966threading_10------------------------------------------PGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLT---------------------------------------------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.478 to 1fxkB
TM-score=0.892 to native
SCOP code=a.2.5.1
TM-score=0.489 to 1iyuA
TM-score=0.592 to native
SCOP code=b.84.1.1
TM-score=0.488 to 1iyuA
TM-score=0.582 to native
SCOP code=b.84.1.1
TM-score=0.485 to 2r2vA
TM-score=0.818 to native
SCOP code=h.1.3.1
TM-score=0.478 to 1fxkB
TM-score=0.892 to native
SCOP code=a.2.5.1

  Experimental Structure

Download 3fppB
SCOP code=b.84.1.1