Template-based Modeling Results for MDTA_ECOLI

Submitted Primary Sequence

>Length 415
MKGSYKSRWVIVIVVVIAAIAAFWFWQGRNDSRSAAPGATKQAQQSPAGGRRGMRSGPLAPVQAATAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLIALHFQEGQQVKAGDLLAEIDPSQFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHPIDLVFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVKARFNNQDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVTPGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEVVEAQSATTPEEKATSREYAKKGARS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKGSYKSRWVIVIVVVIAAIAAFWFWQGRNDSRSAAPGATKQAQQSPAGGRRGMRSGPLAPVQAATAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLIALHFQEGQQVKAGDLLAEIDPSQFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHPIDLVFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVKARFNNQDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVTPGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEVVEAQSATTPEEKATSREYAKKGARS
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEECCCEEEEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEECCEECCCCCEECCCCCCCEEEEEEECCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEEECEECCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEECHHHHEECCCCCEEEEECCCCEEEEEEEEECEEECCEEEEECCCCCCCEEEECCHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKGSYKSRWVIVIVVVIAAIAAFWFWQGRNDSRSAAPGATKQAQQSPAGGRRGMRSGPLAPVQAATAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLIALHFQEGQQVKAGDLLAEIDPSQFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHPIDLVFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVKARFNNQDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVTPGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEVVEAQSATTPEEKATSREYAKKGARS
5422232110000000000000000121123232111101332332212244224222202020010121202111201010200120201031301010010332220221100020021202110120102012121111202211210231152311122202211120110201020020001101121310201020201001120220000122222100001101300000211221011012124333312010112233422120000001120143101010001021332200121000010223234300000210011133020000023422011010200221241000121032212000200230232020101323223333332224322442245
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKGSYKSRWVIVIVVVIAAIAAFWFWQGRNDSRSAAPGATKQAQQSPAGGRRGMRSGPLAPVQAATAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLIALHFQEGQQVKAGDLLAEIDPSQFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHPIDLVFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVKARFNNQDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVTPGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEVVEAQSATTPEEKATSREYAKKGARS
1	MUSTER	2v4dM	0.251	0.769	3.514	threading_1	-----------------------------------------------------------PEVGIVTLEAQTVTLNTELPGRTNAFRIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQAQRYKLLVAD-------QAVS-------KQQYADANAAYLQSKAAVEQARINLRYTKVLSPISGRIGRSAVTEGALVTNGQANAMATVQQLDPIYVDVTQPSTALLRLRRELASGQLAKVSLKLEDGSQYPLEGRLEFSEVSVDEGTGSVTIRAVFPNPNNELLPGMFVHAQLQEGVKQKAILAPQQGVTRDLKGQTALVVNAQNKVELRVIKADRVIGDKWLVTEGLNAGDKIITEGLQFVQPGVEVKTVP-----------------------
2	SPARKS	3lnna	0.236	0.795	6.548	threading_2	-----------------------------------------ALRHEGERLVVPAESPLRRTLAVAPATRETVAAPFNLPAMIEAAKLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSA----DLAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGGTAVRSPINGRVVDLNAATGAYWNDTTAS-LMTVADLSHVFVTANAQEKDLGHVY----VGQSATVKF---DAYDDPQPGKVRYVGQILDADTRTTKVRMVFDNPDGRLRPGMFAQATFLSQP-HEGIVVPMSAIVQSGFYTRAFVEVAPWQFEPRVIKLGAQIGDRMEVKSGLSAGDRVVVKEGVLLND-------------------------------
3	PROSPECT2	3lnnA	0.224	0.795	5.542	threading_3	-----------------------------------------ALRHEGERLVVPAESPLRRTLAVAPATRETVAAPFNLPAMIEADKLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSADLAQ----ANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGGTLVRSPINGRVVDLNAATGAYWNDTTAS-LMTVADLSHVFVTANAQEKDLGHVY----VGQSATVKF---DAYDDPQPGKVRYVGQILDADTRTTKVRMVFDNPDGRLRPGMFAQATFLSQPH-EGIVVPMSAIVQSGFYTRAFVEVAPWQFEPRVIKLGAQIGDRMEVKSGLSAGDRVVVKEGVLLND-------------------------------
4	PPA-I	2v4dM	0.251	0.769	8.650	threading_4	-----------------------------------------------------------PEVGIVTLEAQTVTLNTELPGRTNAFRIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQAQRYKLLVAD-------QAVS-------KQQYADANAAYLQSKAAVEQARINLRYTKVLSPISGRIGRSAVTEGALVTNGQANAMATVQQLDPIYVDVTQPSTALLRLRRELASGQLEKVSLKLEDGSQYPLEGRLEFSEVSVDEGTGSVTIRAVFPNPNNELLPGMFVHAQLQEGVKQKAILAPQQGVTRDLKGQTALVVNAQNKVELRVIKADRVIGDKWLVTEGLNAGDKIITEGLQFVQPGVEVKTVP-----------------------
5	HHPRED-l	3ne5_B	0.169	0.769	5.536	threading_5	----------------------------------------------ASGVRIDPTQTQNLGVKTATVTRGPLTFAQSFPANVSYNEYAIVQARAAGFIDKVYPLVGDKVQKGTPLLDLTIPDWV----EAQSEYLLLRETGGTA-TQTEGILERLRLAGMPEADIR------------------RLIATQKIQTRFTLKAPIDGVITAFDLRAGMNIAKDN--VVAKIQGMDPVWVTAAIPESIAWLVKDASQF------TLTVPARPDKTLTIRKWTLLPGVDAATRTLQLRLEVDNADEALKPGMNAWLQL-NTASEPMLLIPSQALIDTGSEQRVITVDADGRFVPKRVAVFQASQGVTALRSGLAEGEKVVSSGLFLIDSEANISGALERMRS------------------
6	HHPRED-g	1vf7_A	0.265	0.554	5.777	threading_6	------------------------------------------------------------------------TLNTELPGRTNAFRIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLAS-------TQEQAQRYKLLVADQAVSKQQYADANAAYLQSK-------AAVEQARINLRYTKVLSPISGRIGRSAVTEGALVTNGQANAMATVQQLDPIYVDVTQPSTALLRLRRELASGQLAKVSLKLEDGSQYPLEGRLEFSEVSVDEGTGSVTIRAVFPNPNNELLPGMFVHAQLQEG---------------------------------------------------------------------------------------------------
7	SP3	3lnna	0.239	0.795	5.934	threading_7	----------------------------------ALRHEGERL-------VVPAESPLRRTLAVAPATRETVAAPFNLPAMIEAAKLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDS----ADLAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGGTAVRSPINGRVVDLNAATGAYWNDTTAS-LMTVADLSHVFVTANAQEKDLGHVY----VGQSATVKF---DAYDDPQPGKVRYVGQILDADTRTTKVRMVFDNPDGRLRPGMFAQATFLSQP-HEGIVVPMSAIVQSGFYTRAFVEVAPWQFEPRVIKLGAQIGDRMEVKSGLSAGDRVVVKEGVLLND-------------------------------
8	SAM-T99	2v4dM	0.263	0.769	8.566	threading_8	-----------------------------------------------------------PEVGIVTLEAQTVTLNTELPGRTNAFRIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLAS-------TQEQAQRYKLLVADQAVSKQQYADANAAYL-------QSKAAVEQARINLRYTKVLSPISGRIGRSAVTEGALVTNGQANAMATVQQLDPIYVDVTQPSTALLRLRRELASGQLAKVSLKLEDGSQYPLEGRLEFSEVSVDEGTGSVTIRAVFPNPNNELLPGMFVHAQLQEGVKQKAILAPQQGVTRDLKGQTALVVNAQNKVELRVIKADRVIGDKWLVTEGLNAGDKIITEGLQFVQPGVEVKTVP-----------------------
9	MUSTER	3lnnA	0.236	0.795	3.051	threading_9	-----------------------------------------ALRHEGERLVVPAESPLRRTLAVAPATRETVAAPFNLPAMIEAAKLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSAD----LAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGILAVRSPINGRVVDLNAATGAYWNDTTAS-LMTVADLSHVFVTANAQEKDLGHVY----VGQSATVKF---DAYDDPQPGKVRYVGQILDADTRTTKVRMVFDNPDGRLRPGMFAQATFLSQPHE-GIVVPMSAIVQSGFYTRAFVEVAPWQFEPRVIKLGAQIGDRMEVKSGLSAGDRVVVKEGVLLND-------------------------------
10	SPARKS	3h9ia	0.167	0.708	4.623	threading_10	--------------------------------------------------------TQNLGVKTATVTRGPLTFAQSFPANVSEYQYAIVQARAAGFIDKVYLTVGDKVQKGTPLLDLTIPDWVEAQSEYLLLRE----------------------TGGTATQTEGILERLRLAGMP-EADIRRLIATQKIQTRFTLKAPIDGVITAFDLRAGMNIAKDN--VVAKIQGMDPVWVTAAIPESIAWLVK------DASQFTLTVPARPDKTLTIRKWTLLPGVDAATRTLQLRLEVDNADEALKPGMNAWLQLNTAS-EPMLLIPSQALIDTGSEQRVITVDADGRFVPKRVAVFQASQGVTALRSGLAEGEKVVSSGLFLI---------------------------------

Predicted Tertiary Structure


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TM-score=0.422 to 1skvA SCOP code=a.30.5.1	TM-score=0.442 to 1gjxA SCOP code=b.84.1.1	TM-score=0.460 to 2r2vA SCOP code=h.1.3.1	TM-score=0.460 to 1kd9A SCOP code=h.1.3.1	TM-score=0.436 to 2r2vA SCOP code=h.1.3.1