Template-based Modeling Results for MODF_ECOLI

Submitted Primary Sequence

>Length 490
MSSLQILQGTFRLSDTKTLQLPQLTLNAGDSWAFVGSNGSGKSALARALAGELPLLKGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLGPGEDDTGRTTAEIIQDEVKDAPRCMQLAQQFGITALLDRRFKYLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAERLASLHQSGITLVLVLNRFDEIPEFVQFAGVLADCTLAETGAKEELLQQALVAQLAHSEQLEGVQLPEPDEPSARHALPANEPRIVLNNGVVSYNDRPILNNLSWQVNPGEHWQIVGPNGAGKSTLLSLVTGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTTVRNVILSGYFDSIGIYQAVSDRQQKLVQQWLDILGIDKRTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLIRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGGLYRYVLTKIY
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSSLQILQGTFRLSDTKTLQLPQLTLNAGDSWAFVGSNGSGKSALARALAGELPLLKGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLGPGEDDTGRTTAEIIQDEVKDAPRCMQLAQQFGITALLDRRFKYLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAERLASLHQSGITLVLVLNRFDEIPEFVQFAGVLADCTLAETGAKEELLQQALVAQLAHSEQLEGVQLPEPDEPSARHALPANEPRIVLNNGVVSYNDRPILNNLSWQVNPGEHWQIVGPNGAGKSTLLSLVTGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTTVRNVILSGYFDSIGIYQAVSDRQQKLVQQWLDILGIDKRTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLIRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGGLYRYVLTKIY
CCEEEECCEEEEECCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCEEEEEECCEEEEECCHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEECCEECCCCCCHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCEEEEEECCEEEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSSLQILQGTFRLSDTKTLQLPQLTLNAGDSWAFVGSNGSGKSALARALAGELPLLKGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLGPGEDDTGRTTAEIIQDEVKDAPRCMQLAQQFGITALLDRRFKYLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAERLASLHQSGITLVLVLNRFDEIPEFVQFAGVLADCTLAETGAKEELLQQALVAQLAHSEQLEGVQLPEPDEPSARHALPANEPRIVLNNGVVSYNDRPILNNLSWQVNPGEHWQIVGPNGAGKSTLLSLVTGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTTVRNVILSGYFDSIGIYQAVSDRQQKLVQQWLDILGIDKRTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLIRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGGLYRYVLTKIY
3200112401020231300220101023010000003311010000100001022240101023120231123201300121122321311110210101011221133221021013003202022123231220120101101001001020100001100310122012200200220252210000000203100200110000120100120223201221101101102312223223233222332232321101022010112311002200020230100000032110101000000011220231100011231222321220333000003113121221010110001001211212322232113002300320203231121012201301110000010013201000011003100220121023002201431400000000103101200021000012010022123434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSSLQILQGTFRLSDTKTLQLPQLTLNAGDSWAFVGSNGSGKSALARALAGELPLLKGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLGPGEDDTGRTTAEIIQDEVKDAPRCMQLAQQFGITALLDRRFKYLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAERLASLHQSGITLVLVLNRFDEIPEFVQFAGVLADCTLAETGAKEELLQQALVAQLAHSEQLEGVQLPEPDEPSARHALPANEPRIVLNNGVVSYNDRPILNNLSWQVNPGEHWQIVGPNGAGKSTLLSLVTGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTTVRNVILSGYFDSIGIYQAVSDRQQKLVQQWLDILGIDKRTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLIRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGGLYRYVLTKIY
1	MUSTER	3bk7A	0.183	0.924	2.683	threading_1	LPEQLDEDCVHRYGVNAFVLYRLPIVKDGMVVGIVGPNGTGKTTAVKILAGQLIPNLCERAFRGNELQNYFERLKNGEIRPVVKPQYVDLLPVKGKVRELLKKVDEVG------KFEEVVKELELENVLDRELHQLSGGELQRVAIAAALLRKAHFYFFDEPSSYLDIRQRLKVARVIRRLANEGKAVLVVEHDLAVLDYLSDVIHVVYGGIFSKPKGTRNGINEFLQGYLKDE-NVRFRPYEIRFTKLSERVDVERETLVEYPRLVKDYGSF-KLEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVE-EPTEGKVEWDL----------------TVAYKPQYIKAEYEGTVYELLSK--------IDSSKLNSNFYKTELLKPLGIID-LYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYV--DRLIVFE-GEPGRHGRLPPM
2	SPARKS	1yqta	0.188	0.910	5.011	threading_2	-----EEDCVHRYGV-NAFVLYRLPVVKEGVVGIVGPNGTGKSTAVKILAGQLIPNLCGRAFRGNELQNYFEKLKNGEIRPVVKPQYIPKAVKGK-------VIELLKKADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPVYGIFSQPKGTRNGINEFLRGYLKDENVRFRPYEIKFTKTGEIERETLVTYPRLVKDYGS-FRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEE-PTEGKIEWDLT----------------VAYKPQYIKADYEGTVYELLSKIDASKL--------NSNFYKTELLKPLGI-IDLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLEKN-EKTALVVEHDVLIDY--VSDRLVFEGEPGKYGRAEGNRF
3	PROSPECT2	1yqtA	0.194	0.924	3.772	threading_3	E-----EDCVHRYGV-NAFVLYRLPVVKEGVVGIVGPNGTGKSTAVKILAGQLIPNLCGDNDSWDGVIAFRGNELQNYFEKLKNGEIRPVVKPQYVDLIPKAVIELLKKADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPVYGIFSQPKGTRNGINEFLRKDENVRFRPYEIKFTKTGERVEIERETLVTYPRLVKDYGSF-RLEVEPGEIKKGEVIGIVGPNGIGKTTFVKLAGVE--EPTEGKIEWDL--------------TVAYKPQY--IKADYEGTVYELLSKIDASKLNS--------NFYKTELLKPLGI-IDLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHL-EKNEKTALVVEHDV--LIDYVSDRLVFEGEPGKYGRALPPIA
4	PPA-I	3ozxA	0.166	0.908	4.314	threading_4	-----EGEVIHRYKV-NGFKLFGLPTKNNTILGVLGKNGVGKTTVLKILAGEIIPNFG-----DPNSKVGKDEVLKRFIYNYFKELYSNELKIVHKIGTVNEILTKIDERGKKDEVKELLNMTNLWN---KDANILSGGGLQRLLVAASLLREADVYIFDQPSSYLDVRERMNMAKAIRELL-KNKYVIVVDHDLIVLDYLTDLIHIIY-GESSVYGRVSKSYA-ARVGINNFLKGYLPAENMKIRPDEIKFMLKLK-TKMKWTKIIKKLGDFQLVV-DNGEAKEGEIIGILGPNGIGKTTFARILVGEIT-ADEGSVTPEKQI---------LSYKPQRIFPNYDGT------VQQYLENASKDALSTSS-------WFFEEVTKRLNLHR-LLESNVNDLSGGELQKLYIAATLAKEADLYVLDQPSSYLDVEERYIVAKAIKRVTRERKAVTFIIDHDLSIHDYI-ADRIIVFK-GEPEKAGLATSP
5	HHPRED-l	1yqt_A	0.192	0.902	2.464	threading_5	----E-EDCVHRYGVNFVLYRLP-VVKEG-VVGIVGPNGTGKSTAVKILAGQLIPNLCNDSWDGVIRRGNELQNKNGEIRPVVKPQYVDLIPKAVKG---KVIEL-LKKADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPGSQPKGTRNGINEF-LRGYLKDENVRFRPYEIKFTKTGERVEIERETLVTYPRLVKDYGS-FRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEP-TEGKIEWDLT--------------VAYKPQYIKADY--EGTVYELLSKI--DAS------KLNSNFYKTELLKPLGII-DLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHL-EKNEKTALVVEHDVL-IDYVS-DRL-VFE-GEYGRALPP---
6	HHPRED-g	1yqt_A	0.199	0.873	1.961	threading_6	----E-EDCVHRYGVN------AFVLKEG-VVGIVGPNGTGKSTAVKILAGQLIPNGDNDSFRGNELQN----YFEKLKRPVVKPQYIPKAVKGKVI-ELLK------KADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEIFSQPKGTRNGI----NEFLRGYLKDENVRYEIKFTKTGERVEIERETLVTYPRLVKDYGS-FRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEE-PTEGKIEWDLT----------------VAYKPQYIKADYEGTVYELLSKIDA-S-------KLNSNFYKTELLKPLGII-DLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHL-EKNEKTALVVEHDVL-ID-YVSDRL-VFEPGKYGRALPP---
7	SP3	1yqta	0.188	0.910	5.264	threading_7	-----EEDCVHRYG-VNAFVLYRLPVVKEGVVGIVGPNGTGKSTAVKILAGQLIPNLCGRAFRGNELQNYFEKLKNGEIRPVVKPQYIPKAVKGK-------VIELLKKADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPVYGIFSQPKGTRNGINEFLRGYLKDENVRFRPYEIKFTKTGEIERETLVTYPRLVKDYGS-FRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEE-PTEGKIEW----------------DLTVAYKPQYIKADYEGTVYELLSKIDASKLNS--------NFYKTELLKPLGI-IDLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLEKN-EKTALVVEHDV-LIDY-VSDRLVFEGEPGKYGRAEGNRF
8	SAM-T99	3g61A	0.193	0.953	2.764	threading_8	---LEFKNIHFSYKEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEP--LFATTIAENIRYGREDVTMEIEKAVKEANAYDFIMKLDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREG-RTTIVIAHRLST-VRNADVIAGFDGGVIVEQGNHDELMSASHIIRIIEKTPEIDSYSTQGLKPNML------EGNVQFSGVVFNYPSIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPM-AGSVFLDGKEIKQ-LNVQWLRAQLGIVSQEPILFD---CSIAENIAYGDNSRVVSYEIVRAAKEANIHQFIDSLKYNT-RVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDK--AREGRTCIVIAHRLSTIQN-ADLIVVI-QNGKVKEHGTHQQL
9	MUSTER	3ozxA	0.169	0.908	2.520	threading_9	------GEVIHRYKV--GFKLFGLPPKNNTILGVLGKNGVGKTTVLKILAGEIIPNFG-----DPNSKVGKDEVLKRFIYNYFKELYSIVHKIQYVEYASKTVNEILTKIDERGKKDEVKELLNMTNLWNKDANILSGGGLQRLLVAASLLREADVYIFDQPSSYLDVRERMNMAKAIRELL-KNKYVIVVDHDLIVLDYLTDLIHIIY-GESSVYGRVSKSYA-ARVGINNFLKGYLPAENMKIRPDEIKFMLKLK-TKMKWTKIIKKLGDFQLV-VDNGEAKEGEIIGILGPNGIGKTTFARILVGEIT-ADEGSVTPEKQI---------LSYKPQRIFPNYDGTVQQYLE--NASKDALSTS-----------SWFFEEVTKRLNLHR-LLESNVNDLSGGELQKLYIAATLAKEADLYVLDQPSSYLDVEERYIVAKAIKRVTRERKAVTFIIDHDLSIHDYI--DRIIVFK-GEPEKAGLTSPV
10	SPARKS	3g5ua	0.179	0.937	3.607	threading_10	QGNLEFKNIHFSYPSVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYG---REDVT----MDEIEKAVKEANAYDFIMKLPHQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAR-EGRTTIVIAHRLSTVRN-ADVIAGFDGGVIVEQGNHDELMRE-KGIYFKLVMTQTLDEDVPDSYSTQGLKPNMLEGNVQFSGVVFNYPTIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFY-DPMAGSVFLDGKEIKQLN-VQWLRAQLGIVSQEPICS----------IAENIAYGDNSRVVS----YEEIVRAAKEANIH-QFIDSLPDKYSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKARE--GRTCIVIAHRLSTIQN--ADLIVVIQNGKVKEHGTQQLL

Predicted Tertiary Structure


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TM-score=0.576 to 1ji0A SCOP code=c.37.1.12	TM-score=0.579 to 1sgwA SCOP code=c.37.1.12	TM-score=0.560 to 1vplA SCOP code=c.37.1.12	TM-score=0.580 to 1sgwA SCOP code=c.37.1.12	TM-score=0.588 to 1sgwA SCOP code=c.37.1.12