Template-based Modeling Results for MSBB_ECOLI

Submitted Primary Sequence

>Length 323
METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMAGIALTPPKFRDPILARLGRFAGRLGKSSRRRALINLSLCFPERSEAEREAIVDEMFATAPQAMAMMAELAIRGPEKIQPRVDWQGLEIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAMFHNQGNPVFDYVWNTVRRRFGGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSEFVDFFATYKATLPAIGRLMKVCRARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHTIARRMNEEVEIFVGPRPEQYTWILKLLKTRKPGEIQPYKRKDLYPIK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMAGIALTPPKFRDPILARLGRFAGRLGKSSRRRALINLSLCFPERSEAEREAIVDEMFATAPQAMAMMAELAIRGPEKIQPRVDWQGLEIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAMFHNQGNPVFDYVWNTVRRRFGGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSEFVDFFATYKATLPAIGRLMKVCRARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHTIARRMNEEVEIFVGPRPEQYTWILKLLKTRKPGEIQPYKRKDLYPIK
CCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEECHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMAGIALTPPKFRDPILARLGRFAGRLGKSSRRRALINLSLCFPERSEAEREAIVDEMFATAPQAMAMMAELAIRGPEKIQPRVDWQGLEIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAMFHNQGNPVFDYVWNTVRRRFGGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSEFVDFFATYKATLPAIGRLMKVCRARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHTIARRMNEEVEIFVGPRPEQYTWILKLLKTRKPGEIQPYKRKDLYPIK
55433332321130111011020000000000000011001300100010002000200320122011002200133132112200120021002000000101121232122201020130022025343200000000000000000001201300000122213101100110143121200123300210020033120000001222134310001012222011100010031030200000001134212010111111332232212100220121012001220310010041021233232321333222324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMAGIALTPPKFRDPILARLGRFAGRLGKSSRRRALINLSLCFPERSEAEREAIVDEMFATAPQAMAMMAELAIRGPEKIQPRVDWQGLEIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAMFHNQGNPVFDYVWNTVRRRFGGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSEFVDFFATYKATLPAIGRLMKVCRARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHTIARRMNEEVEIFVGPRPEQYTWILKLLKTRKPGEIQPYKRKDLYPIK
1	PROSPECT2	1sqfA	0.118	0.969	1.343	threading_1	RNLVEQGQSLSNILPPLQKVSDKDKALLQELCFGVLRTLSQQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFAVRLETPAPVHALCMTWLAPQNGEHILCAAPGGKTTHILEVAPEAQVVAVDIDLGMKATVKQGDGRYP----------SQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPNSLQIKAFLQRTADETGTPEQPGKQNLPGAIK
2	HHPRED-l	1iuq_A	0.121	0.873	1.693	threading_2	-----------ASHSRKFLDVRSEEELLS-CIKKETEKLPPNVAAG-EELY--------QNYRNAVIE---SGNPK---A-DEIVLSN-TVALDRILLDVEDYYIFGQNYIRGNSFVGNLSLFKEKLQQGHNVVLISNHQTEADPAIISLLLENENTIFVAG---DRVLADPLCKPFSIRNLICVYSKRSLKE-ALLLRGGSLIWIAPSGGRDRSTGEWYPA-PFDASSVDN-RRLIQHSDVPLFPLALLCHDIFNGAGLSVAPEISFATHKNPEEVREAYSKALFDSVA----QYNVLKTAISGKQGLGASTA-DVSLQPW-
3	HHPRED-g	1iuq_A	0.112	0.858	1.515	threading_3	-----------ASHSRKFLDVRSEEELLS-CIKKETEKLPPNVAAG-E--------ELYQNYRNAV---IESGNPKA--D--EIVLSN-LDRILFDYYIFGQNYIRPLID-FGNSFVGNLSLFKDILQQGHNVVLISNHQTEADPAIISLLLEKENTIFVARVLADPLCKPFSIGRNLSKKKRKANTRS-LKE-ALLLRGGSLIWIAPSG---GRDRPDPSTYAPDASSVDN-RRLIQHSDVPLFPLALLCVIAFNGAGLSVAPEISEIAATNPEEVREAYSKALFDSVA----QYNVLKTAISGKQGADVSLSQPW------
4	PROSPECT2	1k30a	0.102	0.876	1.305	threading_4	SHSR------------KFLDVRS-EEELLSCIKKETEKLPPNVAAGMEELYQNYRNAVNPKADEIVLSNMTVAL--------DRILLDVYYIFGQNYIRPLIDF--------GNSFVGNLSLFKDIEQQGHNVVLISNHQTEADPAIISLLSIGRNLICVYSKKHMFDIPELTETKRKAN-------TRSLKEMALLLRGGSLIWIAPSGGRDRPDPSTGEWYPAPASSVDNMRRLIQHSDVPLFPLALLRVIAFNGAGLSVAPEISAATHKNPEEVREAYSKALFDSVAMQYNVLKTAISGKQGLGASTADV----SLSQPW
5	PROSPECT2	1didA	0.092	0.910	1.236	threading_5	VQPTPAGWTGADPFGVATRKNLDPVEAVHKLAELDNDLIPFDATEAEREKILGDFNQALKDTGLFSHPVFKDGGFTSNDRSIRRFALAKVLHNIDLAAEMG----------AETFVMWGLAAALDRMRE------------GVDTAAGYIKDKGYNLRIALEPKPNETVGHGLAFIEQLEHGDIVAGLNFTHGIAQALWAEKLFHIDLNGQRGIKYDQDLVFGHGDLTSAFFTVDLLENGFPN-------GGPKYTGPRHFDYKPSRTDGYDGVWDSAKANMSMYLLLKERALAKTSGVFELGETTLNAGESAEAAAERNFAR
6	PROSPECT2	1q7mA1	0.106	0.820	1.210	threading_6	MRNRRKYGYDDLPEELNIKAPD-----VVLKVHRSYIESGSDVILTNTFGATRMKLRKHGLEDKLDPIVRNAV----------RIARRAAGEKLVFGDIGPTGELPYPLGSTLFEEFYFRETVEIMVEEGVDGIIFESDILELKAAVLAAREVSRDVFLIAHMTFD--------------EKGRSLTGTDPANFAITFD-------------ELDIDALGINCSLGPEEILPIFQELSQYTDKFLVVEPNAGKP-------IVENGKTVYPLKPHDFAVHIDSYYELGVGTTPEHVKLFRKVLGNRKPLQR---------KKK
7	PROSPECT2	1k6wa2	0.091	0.854	1.207	threading_7	TTQTAGQPNWNQSGTLFEGIERWAERK---------ALLTHDDVKQRAWQTLKWQIANG------IQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGILSYP----NGEALLEEALRLGADVVGAIPHFESLHKTFALAQKYDRLIDVHCDDEQSRFVETVAALAHHEGMGARVYNGAYTSRLFRLLKMSGINFVAGRFDTYPKRRGITRV------------KEMLESGINVCFGHDD-----------VFDPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGLNLIARTLNLQDYGIAA-----GNSAN
8	MUSTER	2yr4A	0.123	0.960	0.698	threading_8	YVGSDPKDWEDPDSPTLKVLGVVAGGLVGNPQGENVAMYP--IANVDPAKIAAILNAATPPADALERIQTKYW-----PEFIAQYDGLTLGAAVREIVTVAFEKGTLPPVDGVLDVDESISYYVELFGRGTGGFKPLYNISLVEMMRLILWDYSNEYTLPV-TENVEFIRNLFLKAQNVGAGKLVVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFLAVPHDQLTPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPL--LLSDSSPAANARIVTAIGQ-LHMARSSKVFAT--VKTAALDQPWVPQWRGEPIKA
9	SPARKS	2vsfa	0.104	0.981	0.536	threading_9	REVMAGNEAACPYFNFKIRSDETKRFLFAEEFYDYGERNPYESMKAALPVIAPYAYFLNRSVAEKFLSHWGV-SRNLPDIGRSIISVESLNRADREAQAYGDPELSQKIHVSDLIEMI-RSALQSMVSEGKGDVRIRFQ----EFMEYMRIMNKRSEREIRSLLNYLFGEYVENEKEKVGKVPFSYCSSVASRIIAFSDQDEEKYAAILSPEDGGYMQAAVLKESKSGTLDPFDFYSDITGFEIPFKKIGEIFPPENRYIAYYDGVSSKYDTLDEKELDRMATVIEDIILKVYSLMDRVENRVSFEHMKEYRGIDQKELYSML
10	PROSPECT2	1q2lA2	0.093	0.901	1.195	threading_10	LIKSEKKYDHSRYFASELRNPKAMDSARNQVMFALNDYLAGLALDQLSNQASVGANGYTQRLPQLFQALLEGYFYTATEDQLEQAKSWYNQMMAFEQAIMPAQMLFSRDERRKILPSITLKEVLAYRDAARPEFMVIGNMTEAQATTLA----------------RDVQKQLGADGSEWCRNKDVVVD-----------KKQSVIFEKAGNSTDSALAAVFVPTGYDEYSSAYSSLLGQILGYAVFAFPMSVGRQWGMGFLLQ-----SNDKQPSFLWERYKAFFPTAEAKTPQKLADFFHQAVVEPQGSGSQNGKAEYVHEK

Predicted Tertiary Structure


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TM-score=0.589 to 1sqfA SCOP code=a.79.1.3	TM-score=0.737 to 1k30A SCOP code=c.112.1.1	TM-score=0.763 to 1k30A SCOP code=c.112.1.1	TM-score=0.689 to 1k30A SCOP code=c.112.1.1	TM-score=0.654 to 1didA SCOP code=c.1.15.3