Template-based Modeling Results for NANC_ECOLI

Submitted Primary Sequence

>Length 238
MKKAKILSGVLLLCFSSPLISQAATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWNTIHDNKKENAALNDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKAKILSGVLLLCFSSPLISQAATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWNTIHDNKKENAALNDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL
CCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEECCEEEEECCCCEEEEEEEEEEEEECCCEEEEEEEEHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEEEEEEEEEECCCEECCCCCCCEEEEEEEEEEEECCCEEEEEEEEEEECCCEECCCCCCCCCEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKAKILSGVLLLCFSSPLISQAATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWNTIHDNKKENAALNDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL
4321111000000000000112100010101022224211110100100421010001011222232343320212101020000020332000100000111331120000020001014200000100011311333322232243211100000002012201010100001222212123444110100010102013300000100102332222343322210001001132
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKAKILSGVLLLCFSSPLISQAATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWNTIHDNKKENAALNDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL
1	MUSTER	2wjqA	1.000	0.861	3.266	threading_1	-----------------------ATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWNTI----------NDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL
2	SPARKS	2wjqa	0.990	0.861	6.683	threading_2	-----------------------ATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWN----------TINDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL
3	PROSPECT2	2wjqA	0.990	0.861	3.483	threading_3	-----------------------ATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWN----------TINDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL
4	PPA-I	2wjqA	0.995	0.861	7.978	threading_4	-----------------------ATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWNT----------INDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL
5	HHPRED-l	2wjr_A	0.995	0.853	10.999	threading_5	------------------------ALDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWNTI----------NDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFK-
6	HHPRED-g	2wjr_A	0.995	0.857	9.719	threading_6	------------------------ALDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWNTI----------NDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL
7	SP3	2wjqa	0.990	0.861	5.745	threading_7	-----------------------ATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWN----------TINDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL
8	SAM-T99	2wjqA	0.990	0.861	8.783	threading_8	-----------------------ATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWN----------TINDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL
9	MUSTER	1phoA	0.057	0.966	1.076	threading_9	YGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFFGVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFG-GSDFAISGAYTNSDRTNERAEAWATGLKYDA-NNIYLATFYSE----TRKMTPITGGFANKTQNFEAVAQYQFDFGLRPSLGYVLSKGKDI-EGIGDEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSD-NKLNINNDDIVAVGMTYQF
10	SPARKS	1t16a	0.101	1.000	1.124	threading_10	SRNPALITMFDRPTFSAGAVYIDPDVNISGTSPSGRSLKAPNMHFVAPINDQFGWGASILATEFNDTYAGGSVGGTTMNLNLSGAYRLNNAWSFGLGFNAVYARNQWGFGWNAGILYELDKNNRYALTYRSRAFNNYGLPIPTATGGATPEMWEVSGYNRVDPQWAIHYSLAYTSWSQKATSTSGDKDAYRIALGTTYYYDDNWTFRTGIAFDDSPVPAQNRSDQDRFWLSAGTTYAF

Predicted Tertiary Structure


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TM-score=0.655 to 1tlzA TM-score=0.998 to native SCOP code=f.4.6.1	TM-score=0.655 to 1tlzA TM-score=0.998 to native SCOP code=f.4.6.1	TM-score=0.655 to 1tlzA TM-score=0.967 to native SCOP code=f.4.6.1	TM-score=0.655 to 1tlzA TM-score=0.967 to native SCOP code=f.4.6.1	TM-score=0.655 to 1tlzA TM-score=0.980 to native SCOP code=f.4.6.1

Experimental Structure

Download 2wjqA

SCOP code=f.4.6.1