Template-based Modeling Results for NIKC_ECOLI


  Submitted Primary Sequence

>Length 277
MNFFLSSRWSVRLALIIIALLALIALTSQWWLPYDPQAIDLPSRLLSPDAQHWLGTDHLGRDIFSRLMAATRVSLGSVMACLLLVLTLGLVIGGSAGLIGGRVDQATMRVADMFMTFPTSILSFFMVGVLGTGLTNVIIAIALSHWAWYARMVRSLVISLRQREFVLASRLSGAGHVRVFVDHLAGAVIPSLLVLATLDIGHMMLHVAGMSFLGLGVTAPTAEWGVMINDARQYIWTQPLQMFWPGLALFISVMAFNLVGDALRDHLDPHLVTEHAH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNFFLSSRWSVRLALIIIALLALIALTSQWWLPYDPQAIDLPSRLLSPDAQHWLGTDHLGRDIFSRLMAATRVSLGSVMACLLLVLTLGLVIGGSAGLIGGRVDQATMRVADMFMTFPTSILSFFMVGVLGTGLTNVIIAIALSHWAWYARMVRSLVISLRQREFVLASRLSGAGHVRVFVDHLAGAVIPSLLVLATLDIGHMMLHVAGMSFLGLGVTAPTAEWGVMINDARQYIWTQPLQMFWPGLALFISVMAFNLVGDALRDHLDPHLVTEHAH
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNFFLSSRWSVRLALIIIALLALIALTSQWWLPYDPQAIDLPSRLLSPDAQHWLGTDHLGRDIFSRLMAATRVSLGSVMACLLLVLTLGLVIGGSAGLIGGRVDQATMRVADMFMTFPTSILSFFMVGVLGTGLTNVIIAIALSHWAWYARMVRSLVISLRQREFVLASRLSGAGHVRVFVDHLAGAVIPSLLVLATLDIGHMMLHVAGMSFLGLGVTAPTAEWGVMINDARQYIWTQPLQMFWPGLALFISVMAFNLVGDALRDHLDPHLVTEHAH
4221122221010000000000000000300011113100011212002130101013101100000011010010010001111211010000001111010020001002001000200000000001220010000000001001000001110111122200200410101201000010001000000010001001000000000101100211103000001101300221011000000000000000100010012101121223345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMNFFLSSRWSVRLALIIIALLALIALTSQWWLPYDPQAIDLPSRLLSPDAQHWLGTDHLGRDIFSRLMAATRVSLGSVMACLLLVLTLGLVIGGSAGLIGGRVDQATMRVADMFMTFPTSILSFFMVGVLGTGLTNVIIAIALSHWAWYARMVRSLVISLRQREFVLASRLSGAGHVRVFVDHLAGAVIPSLLVLATLDIGHMMLHVAGMSFLGLGVTAPTAEWGVMINDARQYIWTQPLQMFWPGLALFISVMAFNLVGDALRDHLDPHLVTEHAH
1MUSTER2onkC0.1240.8411.181threading_1MRLLFSALLALLSSIILLFVLLPVAATVTL------QLFNFDEFLK---------SD-------PAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSALPGIVVAMLFVSVPIYINQAKEGFASV-DVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIA-Y---YPMIAPTLIYERYLSEGLSAPVAAILILLSLAVFVALRIIG-----------------
2SPARKS2onkc0.1230.8482.506threading_2------MRLLFSALLALLSSIILLFVLLPVAATVTLQLFNFDEFLK-------AASD-------PAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSALPGIVVAMLFVSVPIYINQAKEGFASV-DVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIA----YYPMIAPTLIYERYLSEGLSPVAAILILLSLAVFVALRIIVG-----------------
3PROSPECT21ezfa0.0620.9891.383threading_3NSLKTCYKYLNQMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLLYQPDWRFMESKEKDRQVLEDFPTISLEFRKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGTERANSMGLFLQKTNIIRDYLEDQQGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAAYNNQQVFKGPAVKAIIYQY---MEEIYHRIPDSSTIRTQN
4PPA-I3dhwA0.2020.6793.492threading_4---------------------------------------------------------------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPKLYRTVSAIVNIFRSIPFIILLVWMIPFTSIGLQAAIVPLTVGAAPFIARMVENALLEI-PTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAG---------GLGQIGYQYGYINATVMNTVLVLLVILVYLIQFAGD----------------
5HHPRED-l3tui_A0.1920.7335.152threading_5----------------------------------------------------------MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTNAKLYRTVSAIVNIFRSIPFIILLVWMIPFVGIGLQAAIVPLTVGAAPFIARMVENALLE-IPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAG------GLGQIGYQYGY-IGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTR--------
6HHPRED-g3tui_A0.1920.7334.972threading_6----------------------------------------------------------MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTNAKLYRTVSAIVNIFRSIPFIILLVWMIPFTSIGLQAAIVPLTVGAAPFIARMVENALLE-IPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAG------GLGQIGYQYG-YIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTR--------
7SP32onkc0.1320.8482.034threading_7MRLLFS--ALLALLSSIILLFVLLPVAATVT-------------LQLFNFDEF-------LKAAPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSALPGIVVAMLFVSVPIYINQAKEGFASV-DVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPMIPTLIYERYLSEGLSAAMP--VAAILILLSLAVFVALRIIVG-----------------
8SAM-T993dhwA0.2070.6791.352threading_8MWLLVR---------------------------------------------------------------GVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPKLYRTVSAIVNIFRSIPFIILLVWMIPFTSIGLQAAIVPLTVGAAPFIARMVENALLEI-PTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAG---------GLGQIGYQYIGYNATVMNTVLVLLVILVYLIQFAGD----------------
9MUSTER3dhwA0.2070.6791.134threading_9---------------------------------------------------------------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTGQKLYRTVSAIVNIFRSIPFIILLVWMIPFTSIGLQAAIVPLTVGAAPFIARMVENALLEI-PTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAG---------GLGQIGYQYGYINATVMNTVLVLLVILVYLIQFAGD----------------
10SPARKS3dhwa0.2020.6792.193threading_10---------------------------------------------------------------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPKLYRTVSAIVNIFRSIPFIILLVWMIPFTSIGLQAAIVPLTVGAAPFIARMVENALLEI-PTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAG---------GLGQIGYQYGYINATVMNTVLVLLVILVYLIQFAGD----------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.793 to 2onkC
SCOP code=f.58.1.1
TM-score=0.826 to 2onkC
SCOP code=f.58.1.1
TM-score=0.792 to 2onkC
SCOP code=f.58.1.1
TM-score=0.843 to 1ezfB
SCOP code=a.128.1.2
TM-score=0.786 to 3dhwA
SCOP code=f.58.1.1