Template-based Modeling Results for NIRC_ECOLI

Submitted Primary Sequence

>Length 268
MFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIILIFTLGNLLDPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTFGVKAGSISHGQMWAILPQTWLGNLVGSVFVAMLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALCNWLVCLAIWMALRTEGAAKFIAIWWCLLAFIASGYEHSIANMTLFALSWFGNHSEAYTLAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKANRPVADKFNQTETAAG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIILIFTLGNLLDPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTFGVKAGSISHGQMWAILPQTWLGNLVGSVFVAMLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALCNWLVCLAIWMALRTEGAAKFIAIWWCLLAFIASGYEHSIANMTLFALSWFGNHSEAYTLAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKANRPVADKFNQTETAAG
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIILIFTLGNLLDPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTFGVKAGSISHGQMWAILPQTWLGNLVGSVFVAMLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALCNWLVCLAIWMALRTEGAAKFIAIWWCLLAFIASGYEHSIANMTLFALSWFGNHSEAYTLAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKANRPVADKFNQTETAAG
4332002201210130121122210000000000000000000000001211221011000000000000000000010020100000000211202002000000000001000000000001100111221001001000112111200100010000000000000001313200100000000000000002100000000000101111300000000000000000100000000000000012323332233232232224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIILIFTLGNLLDPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTFGVKAGSISHGQMWAILPQTWLGNLVGSVFVAMLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALCNWLVCLAIWMALRTEGAAKFIAIWWCLLAFIASGYEHSIANMTLFALSWFGNHSEAYTLAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKANRPVADKFNQTETAAG
1	MUSTER	3kcuA	0.279	0.854	2.938	threading_1	---------------------KHPLKTFYLAITAGVFISIAFVFYITATTGMPFGMAKLVGGICFSLGLILCVVCGADLFTS-TVLIVVAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTAQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYSGRSMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWVIYLR-----------------
2	SPARKS	3kcua	0.271	0.854	7.574	threading_2	---------------------KHPLKTFYLAITAGVFISIAFVFYITATTGTPFGMAKLVGGICFSLGLILCVVCGADLFTST-VLIVVAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGMTANGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYSGRSMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDFSHLTVMNFIDNLIPVTIGNIIGGGLLVGLTYWVIYLR-----------------
3	PROSPECT2	3kcuA	0.271	0.854	3.168	threading_3	---------------------KHPLKTFYLAITAGVFISIAFVFYITATTGTPFGMAKLVGGICFSLGLILCVVCGADLFTSTVL-IVVAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGETANGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYSGRSMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDFASPEFNFITDNLIPVTIGNIIGGGLLVGLTYWVIYLR-----------------
4	PPA-I	3kcuA	0.275	0.854	4.623	threading_4	---------------------KHPLKTFYLAITAGVFISIAFVFYITATTGTPFGMAKLVGGICFSLGLILCVVCGADLFTST-VLIVVAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYANGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYSGRSMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRFSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWVIYLR-----------------
5	HHPRED-l	3kcu_A	0.271	0.854	9.466	threading_5	------------------K---HPLKTFYLAITAGVFISIAFVFYITATTGTPFGMAKLVGGICFSLGLILCVVCGADLFTSTVL-IVVAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYANGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYSGRSMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDFSHLTVMNFITNLIPVTIGNIIGGGLLVGLTYWVIYLR-----------------
6	HHPRED-g	3kcu_A	0.272	0.851	8.172	threading_6	------------------KH---PLKTFYLAITAGVFISIAFVFYITATTGTPFGMAKLVGGICFSLGLILCVVCGADLFTSTVL-IVVAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYANGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYSGRSMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRSHLTV-MNFITDNLIPVTIGNIIGGGLLVGLTYWVIYLR-----------------
7	SP3	3kcua	0.271	0.854	6.987	threading_7	---------------------KHPLKTFYLAITAGVFISIAFVFYITATTGTPFGMAKLVGGICFSLGLILCVVCGADLFTST-VLIVVAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMNGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYSGRSMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDFHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWVIYLR-----------------
8	SAM-T99	3klyC	0.264	0.877	8.222	threading_8	--------------TGEGKAKKAAYKSFLLAISAGIQIGIAFVFYTVVTTGMPYGVTKLLGGLAFSLGLILVVITGGELFTSSVLIL-VAKASGKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMGGQLGLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMTFSARSLDKVMVLILPVAMFVSSGFEHCIANMFQVPMAIGIKYDLNFVN-FIVNNLIPVTLGNIVGGGVFVGMWYWLIYLK-----------------
9	MUSTER	3klyC	0.267	0.881	2.870	threading_9	-----------TGEGKA---KKAAYKSFLLAISAGIQIGIAFVFYTVVTTGMPYGVTKLLGGLAFSLGLILVVITGGELFTSSVLIL-VAKASGKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMGGQLGLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMTFSARSTDKVMVLILPVAMFVSSGFEHCIANMFQVPMAIGIKYADLNFVNFIVNNLIPVTLGNIVGGGVFVGMWYWLIYLK-----------------
10	SPARKS	3q7ka	0.255	0.892	7.444	threading_10	--AAMAKVAEEAGVYKATK---HPLKTFYLAITAGVFISIAFVFYITATTGTPYGMAKLIGGICFSLGLILCVICGADLFTSTVL-IVVAKASGRITWGQLAKNWLNVYFGNLIGALLFVLLMWLSGMTANGQWGLNVLQTADHKMHHTFIEAVCLGILANLMVCLAVWMSYSGRSMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDFHLTVMSFITDNLIPVTIGNIIGGGLLVGLTY-----------------------

Predicted Tertiary Structure


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TM-score=0.639 to 1ldfA SCOP code=f.19.1.1	TM-score=0.660 to 1ldfA SCOP code=f.19.1.1	TM-score=0.642 to 1ldfA SCOP code=f.19.1.1	TM-score=0.644 to 2abmA SCOP code=f.19.1.1	TM-score=0.644 to 2abmA SCOP code=f.19.1.1